CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KDM2A
(
Bos taurus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSBTAG00000044032
T167856_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.936
0.936
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.809
0.809
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.745
0.745
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000053688
CxxC
566
612
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Bos taurus
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAM009961
Anopheles maculatus
AMAM009961
I
0.000
AMAM021613
Anopheles maculatus
AMAM021613
I
0.000
BGIBMGA010300
Bombyx mori
BGIBMGA010300
I
0.000
Cflo_05860--XP_394134.2_APIME
Camponotus floridanus
Cflo_05860--XP_394134.2_APIME
I
0.000
Cmyd_10006628
Chelonia mydas
Cmyd_10006628
I
0.000
DAPPUDRAFT_9350
Daphnia pulex
DAPPUDRAFT_9350
I
0.000
DAPPUDRAFT_9412
Daphnia pulex
DAPPUDRAFT_9412
N
0.000
EFV49290
Trichinella spiralis
EFV49290
I
0.000
ENSCING00000013609
Ciona intestinalis
ENSCING00000013609
I
0.000
ENSCSAVG00000007148
Ciona savignyi
ENSCSAVG00000007148
I
0.000
POU2F2
Homo sapiens
ENSG00000028277
D
0.000
POU6F1
Homo sapiens
ENSG00000184271
D
0.000
ENSOANG00000013329
Ornithorhynchus anatinus
ENSOANG00000013329
I
0.000
ENSSHAG00000018562
Sarcophilus harrisii
ENSSHAG00000018562
I
0.000
acj6
Drosophila melanogaster
FBgn0000028
D
0.000
GPUH_0000951201
Gongylonema pulchrum
GPUH_0000951201
I
0.000
HelroG138303
Helobdella robusta
HelroG138303
I
0.000
L596_g13343
Steinernema carpocapsae
L596_g13343
I
0.000
L798_02028
Zootermopsis nevadensis
L798_02028
I
0.000
L898_g18190
Steinernema monticolum
L898_g18190
I
0.000
MESCA009897
Megaselia scalaris
MESCA009897
I
0.000
Ogr05710
Ophisaurus gracilis
Ogr05710
I
0.000
PPAI004106
Phlebotomus papatasi
PPAI004106
I
0.000
SBAD_0000673901
Soboliphyme baturini
SBAD_0000673901
I
0.000
SPER_0000448001
Spirometra erinaceieuropaei
SPER_0000448001
I
0.000