CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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kdm2ab
(
Gasterosteus aculeatus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSGACG00000017741
T168002_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000023440
CxxC
536
582
ALRRRRVRCKRCAACCRKECGTCQFCHDMRKFGGTGRMKKGCLMRRC
Links
Other
CxxC
family TFs
Other
Gasterosteus aculeatus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_007_00960
Aquilegia coerulea
Aquca_007_00960
N
0.000
FRS5
Arabidopsis thaliana
AT4G38180
N
0.000
Bo3g034290
Brassica oleracea
Bo3g034290
N
0.000
Bostr.25542s0007
Boechera stricta
Bostr.25542s0007
N
0.000
Cagra.1383s0007
Capsella grandiflora
Cagra.1383s0007
N
0.000
Carubv10007256m.g
Capsella rubella
Carubv10007256m.g
N
0.000
cassava23399.valid.m1
Manihot esculenta
cassava23399.valid.m1
N
0.000
cassava9536.m1
Manihot esculenta
cassava9536.m1
N
0.000
Ciclev10027888m.g
Citrus clementina
Ciclev10027888m.g
N
0.000
Cla015971
Citrullus lanatus
Cla015971
N
0.000
Cucsa.099970
Cucumis sativus
Cucsa.099970
N
0.000
Eucgr.I01547
Eucalyptus grandis
Eucgr.I01547
N
0.000
evm.TU.supercontig_60.4
Carica papaya
evm.TU.supercontig_60.4
N
0.000
gene12983-v1.0-hybrid
Fragaria vesca
gene12983-v1.0-hybrid
N
0.000
gene17117-v1.0-hybrid
Fragaria vesca
gene17117-v1.0-hybrid
N
0.000
GLYMA11G09400
Glycine max
GLYMA11G09400
N
0.000
GLYMA14G00240
Glycine max
GLYMA14G00240
N
0.000
Gorai.013G065300
Gossypium raimondii
Gorai.013G065300
N
0.000
MDP0000200105
Malus domestica
MDP0000200105
N
0.000
MDP0000261311
Malus domestica
MDP0000261311
N
0.000
MDP0000308670
Malus domestica
MDP0000308670
N
0.000
mgf015959m
Mimulus guttatus
mgf015959m
N
0.000
PK08522.1
Cannabis sativa
PK08522.1
N
0.000
Pm020704
Prunus mume
Pm020704
N
0.000
Pm026968
Prunus mume
Pm026968
N
0.000
POPTR_0004s21880
Populus trichocarpa
POPTR_0004s21880
N
0.000
POPTR_0009s17110
Populus trichocarpa
POPTR_0009s17110
N
0.000
POPTR_0011s14880
Populus trichocarpa
POPTR_0011s14880
N
0.000
PRUPE_ppa001597mg
Prunus persica
PRUPE_ppa001597mg
N
0.000
PRUPE_ppa001606mg
Prunus persica
PRUPE_ppa001606mg
N
0.000
SapurV1A.0047s0510
Salix purpurea
SapurV1A.0047s0510
N
0.000
SapurV1A.0216s0420
Salix purpurea
SapurV1A.0216s0420
N
0.000
SapurV1A.2929s0020
Salix purpurea
SapurV1A.2929s0020
N
0.000
Solyc01g112320.2
Solanum lycopersicum
Solyc01g112320.2
N
0.000
TCM_007609
Theobroma cacao
TCM_007609
N
0.000
Thhalv10024456m.g
Eutrema salsugineum
Thhalv10024456m.g
N
0.000
FRS5
Vitis vinifera
VIT_03s0038g04140
N
0.000
VIT_04s0044g01920
Vitis vinifera
VIT_04s0044g01920
N
0.000