Kdm2b (Rattus norvegicus)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02008 (zf-CXXC) IPR002857 ENSRNOG00000025702 T168293_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		1.000 1.000
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		0.979 0.979
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.894 0.894
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.851 0.851
KDM2A
M01915_2.00 		Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH9212 		0.809 0.809
BGIBMGA012843
M01907_2.00 		Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN		 PBM
Weirauch et al.(2014)
pTH9239 		0.766 0.766
kdm2aa
M01910_2.00 		Danio rerio
NCGNNNNNN
NNNNNNCGN		 PBM
Weirauch et al.(2014)
pTH8585 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000050408 CxxC 347 393

Links

Other CxxC family TFs
Other Rattus norvegicus TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000577 Aedes aegypti AAEL000577 I
AALB004223 Anopheles albimanus AALB004223 I
ACEP20141 Atta cephalotes ACEP20141 I
ACOM038990 Anopheles coluzzii ACOM038990 I
ACYPI29050 Acyrthosiphon pisum ACYPI29050 I
AEPI006364 Anopheles epiroticus AEPI006364 I
AFAF000103 Anopheles farauti AFAF000103 I
AGAP005564 Anopheles gambiae AGAP005564 I
AMEC008183 Anopheles melas AMEC008183 I
AMEM013718 Anopheles merus AMEM013718 I
AMIN010880 Anopheles minimus AMIN010880 I
ASTEI02169 Anopheles stephensi ASTEI02169 I
BGIBMGA003479 Bombyx mori BGIBMGA003479 I
Cflo_10585--XP_394553.3_APIME Camponotus floridanus Cflo_10585--XP_394553.3_APIME I
DAPPUDRAFT_64332 Daphnia pulex DAPPUDRAFT_64332 I
grh Drosophila yakuba FBgn0067967 I
GF11678 Drosophila ananassae FBgn0088718 I
GG21828 Drosophila erecta FBgn0114006 I
GH22029 Drosophila grimshawi FBgn0129490 I
GI19118 Drosophila mojavensis FBgn0141857 I
GL17227 Drosophila persimilis FBgn0154830 I
GM21828 Drosophila sechellia FBgn0176705 I
GK22232 Drosophila willistoni FBgn0224217 I
grh Drosophila melanogaster FBgn0259211 D
GA30279 Drosophila pseudoobscura FBgn0263821 I
GB46725 Apis mellifera GB46725 I
HMEL013326 Heliconius melpomene HMEL013326 I
Hsal_11404--XP_394553.3_APIME Harpegnathos saltator Hsal_11404--XP_394553.3_APIME I
ISCW008081 Ixodes scapularis ISCW008081 I
KGM_04625 Danaus plexippus KGM_04625 I
LCUP010302 Lucilia cuprina LCUP010302 I
LDEC013994 Leptinotarsa decemlineata LDEC013994 I
LLOJ002492 Lutzomyia longipalpis LLOJ002492 I
MCINX002723 Melitaea cinxia MCINX002723 I
MDOA000476 Musca domestica MDOA000476 I
MhA1_Contig3342.frz3.fgene1 Meloidogyne hapla MhA1_Contig3342.frz3.fgene1 I
NBR_0001111401 Nippostrongylus brasiliensis NBR_0001111401 I
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I
NV11321 Nasonia vitripennis NV11321 I
RPRC012881 Rhodnius prolixus RPRC012881 I
SINV20218 Solenopsis invicta SINV20218 I
SMAR000355 Strigamia maritima SMAR000355 I
TC004589 Tribolium castaneum TC004589 I
tetur01g12650 Tetranychus urticae tetur01g12650 I
YQE_09165 Dendroctonus ponderosae YQE_09165 I