e_gw.283.81.1 (Branchiostoma floridae)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 e_gw.283.81.1 T168658_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kdm2ba
M01909_2.00 		Danio rerio
NNNNCGN
NCGNNNN		 PBM
Weirauch et al.(2014)
pTH8577 		0.787 0.787
KDM2B
M01911_2.00 		Homo sapiens
NNNNNNCGN
NCGNNNNNN		 PBM
Weirauch et al.(2014)
pTH9191 		0.787 0.787
FBXL19
M01916_2.00 		Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN		 PBM
Weirauch et al.(2014)
pTH8570 		0.745 0.745
A6H8I1_DANRE
M01906_2.00 		Danio rerio
CGTACGYA
TRCGTACG		 PBM
Weirauch et al.(2014)
pTH9257 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.283.81.1 CxxC 458 504

Links

Other CxxC family TFs
Other Branchiostoma floridae TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020123 Oryza indica BGIOSGA020123 N
GRMZM2G313078 Zea mays GRMZM2G313078 N
LPERR05G17730 Leersia perrieri LPERR05G17730 N
MLOC_41071 Hordeum vulgare MLOC_41071 N
OB05G29380 Oryza brachyantha OB05G29380 N
OBART05G21830 Oryza barthii OBART05G21830 N
OGLUM05G23020 Oryza glumaepatula OGLUM05G23020 N
OLONG_006513 Oryza longistaminata OLONG_006513 N
OPUNC05G19420 Oryza punctata OPUNC05G19420 N
ORGLA05G0190100 Oryza glaberrima ORGLA05G0190100 N
ORUFI05G23090 Oryza rufipogon ORUFI05G23090 N
OS05G0500600 Oryza sativa OS05G0500600 N
Pavir.Ca01302 Panicum virgatum Pavir.Ca01302 N
Pavir.J33892 Panicum virgatum Pavir.J33892 N
Sb09g024690 Sorghum bicolor Sb09g024690 N
Si022117m.g Setaria italica Si022117m.g N