CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE31027
(
Caenorhabditis remanei
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
CRE31027
T168947_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBN06605
M01925_2.00
Caenorhabditis brenneri
NWGTWKN
NMWACWN
PBM
Weirauch et al.(2014)
pTH9247
0.972
1.000
CJA05633_CONSTRUCT
M01936_2.00
PBM CONSTRUCTS
NWGTWDN
NHWACWN
PBM
Weirauch et al.(2014)
pTH9344
0.972
0.979
CBG09413
M01924_2.00
Caenorhabditis briggsae
AATGTTTC
GAAACATT
PBM
Weirauch et al.(2014)
pTH8330
0.966
0.979
dmd-10
M00657_2.00
Caenorhabditis elegans
AWTGTTTC
GAAACAWT
PBM
Narasimhan et al.(2015)
pTH9142
0.963
0.957
WUBG_11979
M01922_2.00
Wuchereria bancrofti
ATGTWTCA
TGAWACAT
PBM
Weirauch et al.(2014)
pTH9296
0.950
0.851
Bm2567
M01923_2.00
Brugia malayi
NNNWGTTKHN
NDMAACWNNN
PBM
Weirauch et al.(2014)
pTH9246
0.950
0.851
dmd-3
M00658_2.00
Caenorhabditis elegans
NNWGTWDN
NHWACWNN
PBM
Narasimhan et al.(2015)
pTH10638
0.909
0.745
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE31027
DM
36
82
RVPNCQKCGQHGRKSRLKGHKRNCPFRECPCAKCAVVTERQKLMADQ
Links
Other
DM
family TFs
Other
Caenorhabditis remanei
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_076870
Acremonium chrysogenum
ACRE_076870
I
0.000
CMQ_1792
Grosmannia clavigera
CMQ_1792
I
0.000
estExt_Genewise1Plus.C_sca_54_chr3_4_00128
Nectria haematococca
estExt_Genewise1Plus.C_sca_54_chr3_4_00128
I
0.000
FFUJ_05561
Fusarium fujikuroi
FFUJ_05561
I
0.000
FOXG_15666
Fusarium oxysporum
FOXG_15666
I
0.000
FVEG_13127
Fusarium verticillioides
FVEG_13127
I
0.000
HMPREF1624_04224
Sporothrix schenckii
HMPREF1624_04224
I
0.000
HPODL_02490
Ogataea parapolymorpha
HPODL_02490
N
0.000
NechaG67823
Fusarium solani
NechaG67823
I
0.000
PV09_05319
Verruconis gallopava
PV09_05319
I
0.000
S40285_07591
Stachybotrys chlorohalonata
S40285_07591
I
0.000
S40288_02997
Stachybotrys chartarum
S40288_02997
I
0.000
SPBR_05968
Sporothrix brasiliensis
SPBR_05968
I
0.000