EFV56925 (Trichinella spiralis)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 EFV56925 T172413_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.853 0.853
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.853 0.853
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.838 0.838
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV56925 E2F 115 198

Links

Other E2F family TFs
Other Trichinella spiralis TFs

553 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29968.m000644 Ricinus communis 29968.m000644 I 0.000
AT2G01818 Arabidopsis thaliana AT2G01818 D 0.000
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.000
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.000
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.000
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.000
cassava40347.m1 Manihot esculenta cassava40347.m1 N 0.000
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 0.000
Cla005897 Citrullus lanatus Cla005897 N 0.000
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.000
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.000
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.000
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.000
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.000
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.000
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.000
Lus10003680.g Linum usitatissimum Lus10003680.g N 0.000
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.000
Lus10028998.g Linum usitatissimum Lus10028998.g N 0.000
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.000
mgf026615m Mimulus guttatus mgf026615m N 0.000
orange1.1g027579m.g Citrus sinensis orange1.1g027579m.g N 0.000
PGSC0003DMG400029466 Solanum tuberosum PGSC0003DMG400029466 N 0.000
PK02661.1 Cannabis sativa PK02661.1 I 0.000
Pm005894 Prunus mume Pm005894 I 0.000
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.000
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.000
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.000
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.000
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.000
Solyc04g008090.2 Solanum lycopersicum Solyc04g008090.2 N 0.000
TCM_011266 Theobroma cacao TCM_011266 I 0.000
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.000
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.000