PRUPE_ppa001511mg (Prunus persica)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 PRUPE_ppa001511mg T180122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FAR1
M06880_2.00 		Arabidopsis thaliana
NNYHCACGCGCYDNH
DNHRGCGCGTGDRNN		 Dap-seq
OMalley et al.(2016)
FAR1_col_a 		0.886 0.886
FAR1
M06881_2.00 		Arabidopsis thaliana
NNNNBDNDNNYHCACGCGCYD
HRGCGCGTGDRNNHNHVNNNN		 Dap-seq
OMalley et al.(2016)
FAR1_colamp_a 		0.886 0.886
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.705 0.705
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ18353 FAR1 48 135

Links

Other FAR1 family TFs
Other Prunus persica TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29647.m002101 Ricinus communis 29647.m002101 I
AMTR_s00025p00048410 Amborella trichopoda AMTR_s00025p00048410 I
Aquca_054_00130 Aquilegia coerulea Aquca_054_00130 I
BHLH2 Arabidopsis thaliana AT1G63650 N
TT8 Arabidopsis thaliana AT4G09820 I
GL3 Arabidopsis thaliana AT5G41315 I
Bo4g141990 Brassica oleracea Bo4g141990 I
Bo9g086910 Brassica oleracea Bo9g086910 N
Bo9g086920 Brassica oleracea Bo9g086920 N
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I
Bra025508 Brassica rapa Bra025508 I
Bra037887 Brassica rapa Bra037887 N
BRADI1G54070 Brachypodium distachyon BRADI1G54070 I
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N
Carubv10002462m.g Capsella rubella Carubv10002462m.g I
Carubv10004345m.g Capsella rubella Carubv10004345m.g I
Carubv10019965m.g Capsella rubella Carubv10019965m.g N
cassava24625.valid.m1 Manihot esculenta cassava24625.valid.m1 I
cassava29522.valid.m1 Manihot esculenta cassava29522.valid.m1 I
Ca_07836 Cicer arietinum Ca_07836 I
Ciclev10019118m.g Citrus clementina Ciclev10019118m.g I
Eucgr.H01487 Eucalyptus grandis Eucgr.H01487 I
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I
gene27827-v1.0-hybrid Fragaria vesca gene27827-v1.0-hybrid I
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I
GLYMA02G16670 Glycine max GLYMA02G16670 I
GLYMA10G03140 Glycine max GLYMA10G03140 I
GLYMA19G33770 Glycine max GLYMA19G33770 I
Gorai.004G215900 Gossypium raimondii Gorai.004G215900 I
Gorai.007G136400 Gossypium raimondii Gorai.007G136400 I
GSMUA_Achr3G17620_001 Musa acuminata GSMUA_Achr3G17620_001 I
GSMUA_Achr6G21490_001 Musa acuminata GSMUA_Achr6G21490_001 I
LPERR07G06180 Leersia perrieri LPERR07G06180 I
MDP0000225680 Malus domestica MDP0000225680 I
MDP0000617077 Malus domestica MDP0000617077 I
MTR_1g072320 Medicago truncatula MTR_1g072320 I
OBART07G07130 Oryza barthii OBART07G07130 I
OMERI07G05880 Oryza meridionalis OMERI07G05880 I
ONIVA07G05400 Oryza nivara ONIVA07G05400 I
orange1.1g037798m.g Citrus sinensis orange1.1g037798m.g I
PGSC0003DMG400012891 Solanum tuberosum PGSC0003DMG400012891 I
PK09702.1 Cannabis sativa PK09702.1 D
Pm020164 Prunus mume Pm020164 I
Pm023805 Prunus mume Pm023805 I
POPTR_0005s23020 Populus trichocarpa POPTR_0005s23020 I
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I
PRUPE_ppa002884m2g Prunus persica PRUPE_ppa002884m2g I
SapurV1A.0076s0350 Salix purpurea SapurV1A.0076s0350 I
Sb02g006390 Sorghum bicolor Sb02g006390 I
SELMODRAFT_73360 Selaginella moellendorffii SELMODRAFT_73360 N
SELMODRAFT_87033 Selaginella moellendorffii SELMODRAFT_87033 N
Si029106m.g Setaria italica Si029106m.g I
Solyc09g065100.1 Solanum lycopersicum Solyc09g065100.1 I
TCM_004403 Theobroma cacao TCM_004403 I
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I
Thhalv10028584m.g Eutrema salsugineum Thhalv10028584m.g I
TT8 Vitis vinifera VIT_07s0104g00090 I