ONIVA10G20780 (Oryza nivara)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 ONIVA10G20780 T194471_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.853 0.944
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.853 0.944
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.847 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.843 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.838 0.861
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.833 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.833 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.833 0.833
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.832 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.832 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.832 0.806
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.830 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.830 0.778
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.823 0.806
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.823 0.806
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.823 0.806
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.819 0.778
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.819 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA10G20780.1 GATA 278 313

Links

Other GATA family TFs
Other Oryza nivara TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29900.m001610 Ricinus communis 29900.m001610 I
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I
BHLH106 Arabidopsis thaliana AT2G41130 N
BGIOSGA002833 Oryza indica BGIOSGA002833 N
BGIOSGA003013 Oryza indica BGIOSGA003013 I
Bo3g035410 Brassica oleracea Bo3g035410 N
Bo4g012960 Brassica oleracea Bo4g012960 N
Bo4g112750 Brassica oleracea Bo4g112750 N
Bo4g190700 Brassica oleracea Bo4g190700 N
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N
Bra004599 Brassica rapa Bra004599 N
Bra014672 Brassica rapa Bra014672 N
Bra016951 Brassica rapa Bra016951 N
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N
Carubv10017947m.g Capsella rubella Carubv10017947m.g N
Carubv10023903m.g Capsella rubella Carubv10023903m.g N
cassava32077.m1 Manihot esculenta cassava32077.m1 I
Ca_06386 Cicer arietinum Ca_06386 I
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I
Cla019977 Citrullus lanatus Cla019977 I
Cucsa.213230 Cucumis sativus Cucsa.213230 I
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I
GLYMA02G15780 Glycine max GLYMA02G15780 I
GLYMA07G32690 Glycine max GLYMA07G32690 I
GLYMA12G33751 Glycine max GLYMA12G33751 I
GLYMA13G36741 Glycine max GLYMA13G36741 I
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I
GRMZM2G016039 Zea mays GRMZM2G016039 I
GRMZM2G043854 Zea mays GRMZM2G043854 I
GRMZM2G166642 Zea mays GRMZM2G166642 I
GRMZM2G369629 Zea mays GRMZM2G369629 N
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N
LPERR01G07000 Leersia perrieri LPERR01G07000 I
LPERR03G10060 Leersia perrieri LPERR03G10060 I
Lus10001885.g Linum usitatissimum Lus10001885.g I
Lus10013917.g Linum usitatissimum Lus10013917.g I
MDP0000249969 Malus domestica MDP0000249969 I
MDP0000256492 Malus domestica MDP0000256492 N
MLOC_64390 Hordeum vulgare MLOC_64390 I
MTR_4g087920 Medicago truncatula MTR_4g087920 I
OB01G13800 Oryza brachyantha OB01G13800 N
OB01G17480 Oryza brachyantha OB01G17480 I
OB03G21490 Oryza brachyantha OB03G21490 I
OBART01G03950 Oryza barthii OBART01G03950 N
OBART03G11320 Oryza barthii OBART03G11320 I
OGLUM01G04250 Oryza glumaepatula OGLUM01G04250 N
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I
OLONG_004075 Oryza longistaminata OLONG_004075 I
OMERI01G03850 Oryza meridionalis OMERI01G03850 N
OMERI01G07330 Oryza meridionalis OMERI01G07330 I
ONIVA01G04390 Oryza nivara ONIVA01G04390 N
ONIVA01G09540 Oryza nivara ONIVA01G09540 I
ONIVA03G12280 Oryza nivara ONIVA03G12280 I
OPUNC01G03610 Oryza punctata OPUNC01G03610 N
OPUNC01G07130 Oryza punctata OPUNC01G07130 I
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I
ORGLA01G0034700 Oryza glaberrima ORGLA01G0034700 N
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I
ORUFI01G04050 Oryza rufipogon ORUFI01G04050 N
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I
OS01G0218100 Oryza sativa OS01G0218100 I
OS03G0260600 Oryza sativa OS03G0260600 I
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I
Pavir.J32610 Panicum virgatum Pavir.J32610 N
PK20225.1 Cannabis sativa PK20225.1 D
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I
Sb01g040450 Sorghum bicolor Sb01g040450 I
Sb03g001730 Sorghum bicolor Sb03g001730 I
Sb03g005250 Sorghum bicolor Sb03g005250 N
Sb09g004820 Sorghum bicolor Sb09g004820 N
Si002517m.g Setaria italica Si002517m.g I
Si012213m.g Setaria italica Si012213m.g N
Si039730m.g Setaria italica Si039730m.g I
TCM_029711 Theobroma cacao TCM_029711 I
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I