CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g112750
(
Brassica oleracea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bo4g112750
T031168_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g112750.1
bHLH
51
99
GRKHREGERRRRERINSNLNKLRNLLSCNSKTDKATLLAKVVQRVNELK
Links
Other
bHLH
family TFs
Other
Brassica oleracea
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH106
Arabidopsis thaliana
AT2G41130
N
0.911
Thhalv10017546m.g
Eutrema salsugineum
Thhalv10017546m.g
N
0.911
Bostr.9345s0019
Boechera stricta
Bostr.9345s0019
N
0.911
Cagra.0578s0007
Capsella grandiflora
Cagra.0578s0007
N
0.911
Carubv10023903m.g
Capsella rubella
Carubv10023903m.g
N
0.911
Cagra.1642s0077
Capsella grandiflora
Cagra.1642s0077
N
0.911
Carubv10017947m.g
Capsella rubella
Carubv10017947m.g
N
0.911
Thhalv10006410m.g
Eutrema salsugineum
Thhalv10006410m.g
N
0.911
Bra004599
Brassica rapa
Bra004599
N
0.911
Bo4g190700
Brassica oleracea
Bo4g190700
N
0.911
SapurV1A.0189s0140
Salix purpurea
SapurV1A.0189s0140
N
0.911
Bra014672
Brassica rapa
Bra014672
N
0.911
Bra016951
Brassica rapa
Bra016951
N
0.911
Bo3g035410
Brassica oleracea
Bo3g035410
N
0.911
Bo4g012960
Brassica oleracea
Bo4g012960
N
0.911
Traes_5BL_CBFAD4B59
Triticum aestivum
Traes_5BL_CBFAD4B59
N
0.898
scaffold_402920.1
Arabidopsis lyrata
scaffold_402920.1
N
0.887
PK23387.1
Cannabis sativa
PK23387.1
N
0.885
cassava7163.valid.m1
Manihot esculenta
cassava7163.valid.m1
N
0.885
Cucsa.340200
Cucumis sativus
Cucsa.340200
N
0.885
Bostr.20505s0075
Boechera stricta
Bostr.20505s0075
N
0.885
gene14814-v1.0-hybrid
Fragaria vesca
gene14814-v1.0-hybrid
N
0.885
MDP0000213892
Malus domestica
MDP0000213892
N
0.885
SapurV1A.0159s0020
Salix purpurea
SapurV1A.0159s0020
N
0.885
MDP0000138102
Malus domestica
MDP0000138102
N
0.885
Lus10018020.g
Linum usitatissimum
Lus10018020.g
N
0.885
Pm025589
Prunus mume
Pm025589
N
0.885
Gorai.007G352300
Gossypium raimondii
Gorai.007G352300
N
0.885
evm.TU.supercontig_92.83
Carica papaya
evm.TU.supercontig_92.83
N
0.885
30180.m001071
Ricinus communis
30180.m001071
N
0.885
POPTR_0016s03460
Populus trichocarpa
POPTR_0016s03460
N
0.885
GLYMA19G30910
Glycine max
GLYMA19G30910
N
0.885
POPTR_0006s03550
Populus trichocarpa
POPTR_0006s03550
N
0.885
GSMUA_Achr8G23980_001
Musa acuminata
GSMUA_Achr8G23980_001
N
0.885
GLYMA03G28150
Glycine max
GLYMA03G28150
N
0.885
GLYMA02G23590
Glycine max
GLYMA02G23590
N
0.885
TCM_024016
Theobroma cacao
TCM_024016
N
0.885
PRUPE_ppa011532mg
Prunus persica
PRUPE_ppa011532mg
N
0.885
chr1.CM0816.330.nc
Lotus japonicus
chr1.CM0816.330.nc
N
0.885
Cla017413
Citrullus lanatus
Cla017413
N
0.885
Ca_07159
Cicer arietinum
Ca_07159
N
0.885
Cla019977
Citrullus lanatus
Cla019977
I
0.875
Eucgr.E02743
Eucalyptus grandis
Eucgr.E02743
I
0.875
Cucsa.213230
Cucumis sativus
Cucsa.213230
I
0.875
Aquca_004_00748
Aquilegia coerulea
Aquca_004_00748
I
0.873
VIT_08s0040g01240
Vitis vinifera
VIT_08s0040g01240
I
0.873
OS03G0811400
Oryza sativa
OS03G0811400
N
0.872
GRMZM2G027068
Zea mays
GRMZM2G027068
N
0.872
ORGLA03G0352000
Oryza glaberrima
ORGLA03G0352000
N
0.872
Pavir.J02699
Panicum virgatum
Pavir.J02699
N
0.872
Solyc10g078380.1
Solanum lycopersicum
Solyc10g078380.1
N
0.872
Sb01g003830
Sorghum bicolor
Sb01g003830
N
0.872
BRADI1G04280
Brachypodium distachyon
BRADI1G04280
N
0.872
PGSC0003DMG400008378
Solanum tuberosum
PGSC0003DMG400008378
N
0.872
Pavir.J24868
Panicum virgatum
Pavir.J24868
N
0.872
Eucgr.A02230
Eucalyptus grandis
Eucgr.A02230
N
0.866
SapurV1A.1185s0010
Salix purpurea
SapurV1A.1185s0010
I
0.863
SapurV1A.1821s0030
Salix purpurea
SapurV1A.1821s0030
I
0.863
Lus10042017.g
Linum usitatissimum
Lus10042017.g
N
0.861
fgenesh2_kg.5__2108__AT3G56770.1
Arabidopsis lyrata
fgenesh2_kg.5__2108__AT3G56770.1
N
0.856
orange1.1g026479m.g
Citrus sinensis
orange1.1g026479m.g
N
0.850
Ciclev10012626m.g
Citrus clementina
Ciclev10012626m.g
N
0.850
mgf009382m
Mimulus guttatus
mgf009382m
N
0.849
Gorai.009G163400
Gossypium raimondii
Gorai.009G163400
I
0.845
TCM_029711
Theobroma cacao
TCM_029711
I
0.845
cassava32077.m1
Manihot esculenta
cassava32077.m1
I
0.843
VIT_14s0068g01580
Vitis vinifera
VIT_14s0068g01580
I
0.843
cassava18812.valid.m1
Manihot esculenta
cassava18812.valid.m1
I
0.843
MDP0000249969
Malus domestica
MDP0000249969
I
0.843