POPTR_0006s03550 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0006s03550 T043817_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s03550.1 bHLH 69 117

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G23590 Glycine max GLYMA02G23590 N 0.914
GLYMA03G28150 Glycine max GLYMA03G28150 N 0.914
GLYMA19G30910 Glycine max GLYMA19G30910 N 0.914
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N 0.914
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N 0.914
PRUPE_ppa011532mg Prunus persica PRUPE_ppa011532mg N 0.914
TCM_024016 Theobroma cacao TCM_024016 N 0.914
Ca_07159 Cicer arietinum Ca_07159 N 0.914
Cla017413 Citrullus lanatus Cla017413 N 0.914
Pm025589 Prunus mume Pm025589 N 0.914
30180.m001071 Ricinus communis 30180.m001071 N 0.914
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N 0.914
Cucsa.340200 Cucumis sativus Cucsa.340200 N 0.914
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N 0.914
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N 0.914
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N 0.914
Lus10018020.g Linum usitatissimum Lus10018020.g N 0.914
MDP0000138102 Malus domestica MDP0000138102 N 0.914
MDP0000213892 Malus domestica MDP0000213892 N 0.914
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N 0.914
PK23387.1 Cannabis sativa PK23387.1 N 0.914
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N 0.914
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I 0.903
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I 0.903
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N 0.901
GRMZM2G027068 Zea mays GRMZM2G027068 N 0.901
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N 0.901
OS03G0811400 Oryza sativa OS03G0811400 N 0.901
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N 0.901
Sb01g003830 Sorghum bicolor Sb01g003830 N 0.901
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N 0.901
Pavir.J02699 Panicum virgatum Pavir.J02699 N 0.901
Pavir.J24868 Panicum virgatum Pavir.J24868 N 0.901
Lus10042017.g Linum usitatissimum Lus10042017.g N 0.890
BHLH106 Arabidopsis thaliana AT2G41130 N 0.888
Bo3g035410 Brassica oleracea Bo3g035410 N 0.888
Bo4g012960 Brassica oleracea Bo4g012960 N 0.888
Bo4g190700 Brassica oleracea Bo4g190700 N 0.888
Bra004599 Brassica rapa Bra004599 N 0.888
Bra016951 Brassica rapa Bra016951 N 0.888
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N 0.888
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N 0.888
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N 0.888
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N 0.888
Carubv10017947m.g Capsella rubella Carubv10017947m.g N 0.888
Carubv10023903m.g Capsella rubella Carubv10023903m.g N 0.888
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N 0.888
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N 0.888
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N 0.888
Bo4g112750 Brassica oleracea Bo4g112750 N 0.885
Bra014672 Brassica rapa Bra014672 N 0.885
Ciclev10012626m.g Citrus clementina Ciclev10012626m.g N 0.880
orange1.1g026479m.g Citrus sinensis orange1.1g026479m.g N 0.880
mgf009382m Mimulus guttatus mgf009382m N 0.879
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N 0.875
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.866
scaffold_402920.1 Arabidopsis lyrata scaffold_402920.1 N 0.864
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.860
LPERR03G32730 Leersia perrieri LPERR03G32730 N 0.856
OGLUM03G38250 Oryza glumaepatula OGLUM03G38250 N 0.856
OMERI03G35360 Oryza meridionalis OMERI03G35360 N 0.856
ONIVA03G40100 Oryza nivara ONIVA03G40100 N 0.856
OPUNC03G35590 Oryza punctata OPUNC03G35590 N 0.856
ORUFI03G40090 Oryza rufipogon ORUFI03G40090 N 0.856
F775_10096 Aegilops tauschii F775_10096 I 0.851
MLOC_66385 Hordeum vulgare MLOC_66385 I 0.851
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I 0.851
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I 0.851
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I 0.851
TRIUR3_31897 Triticum urartu TRIUR3_31897 I 0.851
Cla019977 Citrullus lanatus Cla019977 I 0.851
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.851
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.851
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I 0.842
Eucgr.A02230 Eucalyptus grandis Eucgr.A02230 N 0.842
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.840
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.840
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.840