SAKL0F01496g (Lachancea kluyveri)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 SAKL0F01496g T197232_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DAL80
M00052_2.00 		Saccharomyces cerevisiae
NNNNTANNNN
NNNNTANNNN		 PBM
Badis et al.(2008)
DAL80_2083 		0.838 0.714
DAL80
M07481_2.00 		Saccharomyces cerevisiae
YGATAAG
CTTATCR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1 		0.838 0.714
DAL80
M08564_2.00 		Saccharomyces cerevisiae
VNMGATAD
HTATCKNB		 Misc
DeBoer et al.(2011)
YKR034W_1355 		0.838 0.714
GZF3
M00051_2.00 		Saccharomyces cerevisiae
HGATAAGN
NCTTATCD		 PBM
Badis et al.(2008)
GZF3_2167 		0.838 0.686
GZF3
M01548_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gzf3 		0.838 0.686
GZF3
M07480_2.00 		Saccharomyces cerevisiae
HGATAASN
NSTTATCD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1 		0.838 0.686
GZF3
M08562_2.00 		Saccharomyces cerevisiae
GATAAG
CTTATC		 Misc
DeBoer et al.(2011)
YJL110C_593 		0.838 0.686
GAT1
M00049_2.00 		Saccharomyces cerevisiae
NNNNGATANN
NNTATCNNNN		 PBM
Badis et al.(2008)
GAT1_2166 		0.823 0.686
GAT1
M01546_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gat1 		0.823 0.686
GAT1
M07478_2.00 		Saccharomyces cerevisiae
NHGATAAG
CTTATCDN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1 		0.823 0.686
GAT1
M08560_2.00 		Saccharomyces cerevisiae
WKTGATWW
WWATCAMW		 Misc
DeBoer et al.(2011)
YFL021W_962 		0.823 0.686
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0F01496g GATA 294 328

Links

Other GATA family TFs
Other Lachancea kluyveri TFs

376 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29848.m004632 Ricinus communis 29848.m004632 I
SHN3 Arabidopsis lyrata Al_scaffold_0006_1028 I
SHN2 Arabidopsis thaliana AT5G11190 D
SHN3 Arabidopsis thaliana AT5G25390 I
Bo9g011380 Brassica oleracea Bo9g011380 I
Bo9g171490 Brassica oleracea Bo9g171490 I
Bostr.23997s0014 Boechera stricta Bostr.23997s0014 I
Bostr.29827s0278 Boechera stricta Bostr.29827s0278 I
Bra008985 Brassica rapa Bra008985 I
Bra036543 Brassica rapa Bra036543 I
Cagra.1110s0005 Capsella grandiflora Cagra.1110s0005 I
Carubv10002040m.g Capsella rubella Carubv10002040m.g I
Carubv10003042m.g Capsella rubella Carubv10003042m.g I
Carubv10003050m.g Capsella rubella Carubv10003050m.g I
cassava10120.m1 Manihot esculenta cassava10120.m1 I
cassava30505.valid.m1 Manihot esculenta cassava30505.valid.m1 I
cassava40012.m1 Manihot esculenta cassava40012.m1 I
Ca_01764 Cicer arietinum Ca_01764 I
Ca_09050 Cicer arietinum Ca_09050 I
Ciclev10009526m.g Citrus clementina Ciclev10009526m.g I
Cla021283 Citrullus lanatus Cla021283 I
Cucsa.310360 Cucumis sativus Cucsa.310360 I
evm.TU.supercontig_259.2 Carica papaya evm.TU.supercontig_259.2 I
SHN2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002026 I
gene11636-v1.0-hybrid Fragaria vesca gene11636-v1.0-hybrid I
GLYMA04G07140 Glycine max GLYMA04G07140 I
GLYMA06G07240 Glycine max GLYMA06G07240 I
GLYMA17G31900 Glycine max GLYMA17G31900 I
Gorai.004G292600 Gossypium raimondii Gorai.004G292600 I
Gorai.010G114800 Gossypium raimondii Gorai.010G114800 I
Gorai.011G082900 Gossypium raimondii Gorai.011G082900 I
LjSGA_019003.1 Lotus japonicus LjSGA_019003.1 I
Lus10002015.g Linum usitatissimum Lus10002015.g I
Lus10002912.g Linum usitatissimum Lus10002912.g I
Lus10019414.g Linum usitatissimum Lus10019414.g I
MDP0000178263 Malus domestica MDP0000178263 I
MDP0000287350 Malus domestica MDP0000287350 I
mgf017744m Mimulus guttatus mgf017744m I
MTR_1g012470 Medicago truncatula MTR_1g012470 I
MTR_3g107380 Medicago truncatula MTR_3g107380 I
orange1.1g028913m.g Citrus sinensis orange1.1g028913m.g I
PGSC0003DMG400030228 Solanum tuberosum PGSC0003DMG400030228 I
Pm004616 Prunus mume Pm004616 I
POPTR_0006s26990 Populus trichocarpa POPTR_0006s26990 I
POPTR_0018s01680 Populus trichocarpa POPTR_0018s01680 I
PRUPE_ppa023908mg Prunus persica PRUPE_ppa023908mg I
SapurV1A.0043s0690 Salix purpurea SapurV1A.0043s0690 I
SapurV1A.0192s0020 Salix purpurea SapurV1A.0192s0020 I
TCM_037007 Theobroma cacao TCM_037007 I
Thhalv10005514m.g Eutrema salsugineum Thhalv10005514m.g I
Thhalv10015363m.g Eutrema salsugineum Thhalv10015363m.g I
VIT_04s0008g05440 Vitis vinifera VIT_04s0008g05440 I