ENSPMAG00000005876 (Petromyzon marinus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSPMAG00000005876 T199185_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.878 0.878
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.878 0.878
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.878 0.878
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.878 0.878
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.797 0.797
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.797 0.797
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.797 0.797
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.797 0.797
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.797 0.797
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000006485 Grainyhead 1 74

Links

Other Grainyhead family TFs
Other Petromyzon marinus TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.000
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.000
Bo5g081270 Brassica oleracea Bo5g081270 I 0.000
Bo6g022280 Brassica oleracea Bo6g022280 I 0.000
Bo6g022450 Brassica oleracea Bo6g022450 I 0.000
Bo6g022460 Brassica oleracea Bo6g022460 I 0.000
Bo6g024770 Brassica oleracea Bo6g024770 I 0.000
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.000
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I 0.000
Bra018854 Brassica rapa Bra018854 I 0.000
Bra018869 Brassica rapa Bra018869 I 0.000
Bra030458 Brassica rapa Bra030458 I 0.000
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.000
Carubv10011257m.g Capsella rubella Carubv10011257m.g I 0.000
Cucsa.142990 Cucumis sativus Cucsa.142990 I 0.000
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I 0.000
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.000
TCM_040397 Theobroma cacao TCM_040397 I 0.000
Thhalv10012152m.g Eutrema salsugineum Thhalv10012152m.g I 0.000
Thhalv10012161m.g Eutrema salsugineum Thhalv10012161m.g I 0.000
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I 0.000
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.000