Bo6g022280 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo6g022280 T018696_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g022280.1 B3 172 280

Links

Other B3 family TFs
Other Brassica oleracea TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra018854 Brassica rapa Bra018854 I 0.938
Bra018869 Brassica rapa Bra018869 I 0.892
Bo6g022450 Brassica oleracea Bo6g022450 I 0.883
Bo6g022460 Brassica oleracea Bo6g022460 I 0.863
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.789
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.779
Carubv10011592m.g Capsella rubella Carubv10011592m.g I 0.779
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.758
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.758
Thhalv10012152m.g Eutrema salsugineum Thhalv10012152m.g I 0.758
Thhalv10012161m.g Eutrema salsugineum Thhalv10012161m.g I 0.758
Bra030458 Brassica rapa Bra030458 I 0.750
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I 0.742
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.737
Bo5g081270 Brassica oleracea Bo5g081270 I 0.729
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I 0.726
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I 0.726
Bo6g024770 Brassica oleracea Bo6g024770 I 0.716
Carubv10011257m.g Capsella rubella Carubv10011257m.g I 0.716
TCM_040397 Theobroma cacao TCM_040397 I 0.710