CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g065830
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo4g065830
T199927_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g065830.1
GRAS
241
619
FRTLLTHCAQAISTGDKTTALDLLLQIRQDSSPQGDASQRLAHCFANALEARLQGTTGPVIQTYYNAITSLKETASDILKAYRVYLSSSPFVTLMYFFSFRMILDAAKDAEVLHVVDFGILYGFQWPMFIQYMSGRKDVPRKLRITGIELPQRGLRPAERIEETGRRLSEYCKRFNVPFEYKAIASQHWETIRLDEFDIRPGEVLAVNAGLRLKTLQDETGGEETCPRDAVLKLIRKMNPDVFVHAIVNGSFNAPFFISRFKEAVYHYYALFDMFDSTLPRDNQERIRFEREFYGREAMNVIACEEGDRVERPETYRQWQVRMVRAGFKQKPVRDEIVELFREKLKKWRYHKDFVVDENSKWLLQGWKGRTRYASSCWV
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_19967
Ancylostoma duodenale
ANCDUO_19967
N
ASIM_0001677501
Anisakis simplex
ASIM_0001677501
N
ASU_12719
Ascaris suum
ASU_12719
N
Bm3899
Brugia malayi
Bm3899
N
BTMF_0001429501
Brugia timori
BTMF_0001429501
N
BXY_0574800
Bursaphelenchus xylophilus
BXY_0574800
N
CBG02231
Caenorhabditis briggsae
CBG02231
N
CBN00758
Caenorhabditis brenneri
CBN00758
N
CBN06012
Caenorhabditis brenneri
CBN06012
N
CJA12147
Caenorhabditis japonica
CJA12147
N
CRE29609
Caenorhabditis remanei
CRE29609
N
EVEC_0000982901
Enterobius vermicularis
EVEC_0000982901
N
GPUH_0002405001
Gongylonema pulchrum
GPUH_0002405001
N
HCOI01584000
Haemonchus contortus
HCOI01584000
N
L596_g21063
Steinernema carpocapsae
L596_g21063
N
L889_g15246
Steinernema feltiae
L889_g15246
N
L893_g5132
Steinernema glaseri
L893_g5132
N
L898_g4344
Steinernema monticolum
L898_g4344
N
LOAG_18157
Loa loa
LOAG_18157
N
MhA1_Contig659.frz3.gene12
Meloidogyne hapla
MhA1_Contig659.frz3.gene12
N
Minc00757
Meloidogyne incognita
Minc00757
N
Minc01466
Meloidogyne incognita
Minc01466
N
nAv.1.0.1.g02876
Acanthocheilonema viteae
nAv.1.0.1.g02876
N
nDi.2.2.2.g08539
Dirofilaria immitis
nDi.2.2.2.g08539
N
nLs.2.1.2.g02844
Litomosoides sigmodontis
nLs.2.1.2.g02844
N
nOo.2.0.1.g06284
Onchocerca ochengi
nOo.2.0.1.g06284
N
PEQ_0000361701
Parascaris equorum
PEQ_0000361701
N
PTRK_0001052400
Parastrongyloides trichosuri
PTRK_0001052400
N
SPAL_0000096300
Strongyloides papillosus
SPAL_0000096300
N
SSTP_0000137400
Strongyloides stercoralis
SSTP_0000137400
N
SVE_0382900
Strongyloides venezuelensis
SVE_0382900
N
TCLT_0000822701
Thelazia callipaeda
TCLT_0000822701
N
TCNE_0001786701
Toxocara canis
TCNE_0001786701
N
TELCIR_17986
Teladorsagia circumcincta
TELCIR_17986
N
TELCIR_20778
Teladorsagia circumcincta
TELCIR_20778
N
tag-68
Caenorhabditis elegans
WBGene00006445
N