CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.008G106100
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.008G106100
T202646_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.008G106100.1
GRAS
284
642
IIDQLIQAAELIETGDPVLAQGILARLNHQLSPVGKPFIRAAFYFKEALQLLLRFNTTNTSTLYTTNIIFKIAAYKSFSEISPTIQFMNFTCNQAILEVFEGCNRVHIIDFDIGYGGQWASLMQELVLRNGGAPCMKITVFACLTSYDEFELRFTIENLKHFANEINMGFDIEIVSLEALNSCSWYSLPLHFSENETIAVNLPIGSFSNYPSTLPLILRFVKQLSPKIVVSSDRGCDRTDVPFPHHIIHALQSYSGLLESLDAVNMNLNALEKIERFFLQPSIEKIVLGRHRSLERRPPWRSLFIQFGFSPLTFSNFTESQAECLVQRTPIRGFHVEKRQSALVLCWQRRELIAASAWR
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000670501
Angiostrongylus cantonensis
ACAC_0000670501
N
ALUE_0001384201
Ascaris lumbricoides
ALUE_0001384201
N
ANCCAN_07259
Ancylostoma caninum
ANCCAN_07259
N
Bm6929
Brugia malayi
Bm6929
N
BTMF_0001397601
Brugia timori
BTMF_0001397601
N
EEL_0000079401
Elaeophora elaphi
EEL_0000079401
N
EVEC_0001116601
Enterobius vermicularis
EVEC_0001116601
N
Hba_17251
Heterorhabditis bacteriophora
Hba_17251
N
HCOI01240300
Haemonchus contortus
HCOI01240300
N
HCOI01560600
Haemonchus contortus
HCOI01560600
N
HPLM_0000022101
Haemonchus placei
HPLM_0000022101
N
LOAG_03150
Loa loa
LOAG_03150
N
nAv.1.0.1.g09585
Acanthocheilonema viteae
nAv.1.0.1.g09585
N
nDi.2.2.2.g02045
Dirofilaria immitis
nDi.2.2.2.g02045
N
NECAME_04758
Necator americanus
NECAME_04758
N
nLs.2.1.2.g01196
Litomosoides sigmodontis
nLs.2.1.2.g01196
N
nOo.2.0.1.g03703
Onchocerca ochengi
nOo.2.0.1.g03703
N
PEQ_0000333601
Parascaris equorum
PEQ_0000333601
N
Ppa-slr-2
Pristionchus pacificus
PPA10362
N
SMUV_0000951601
Syphacia muris
SMUV_0000951601
N
TCLT_0000023601
Thelazia callipaeda
TCLT_0000023601
N
TCNE_0000765001
Toxocara canis
TCNE_0000765001
N
WBGene00243860
Onchocerca volvulus
WBGene00243860
N
WUBG_01715
Wuchereria bancrofti
WUBG_01715
N