CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.008G106100
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.008G106100
T202646_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.008G106100.1
GRAS
284
642
IIDQLIQAAELIETGDPVLAQGILARLNHQLSPVGKPFIRAAFYFKEALQLLLRFNTTNTSTLYTTNIIFKIAAYKSFSEISPTIQFMNFTCNQAILEVFEGCNRVHIIDFDIGYGGQWASLMQELVLRNGGAPCMKITVFACLTSYDEFELRFTIENLKHFANEINMGFDIEIVSLEALNSCSWYSLPLHFSENETIAVNLPIGSFSNYPSTLPLILRFVKQLSPKIVVSSDRGCDRTDVPFPHHIIHALQSYSGLLESLDAVNMNLNALEKIERFFLQPSIEKIVLGRHRSLERRPPWRSLFIQFGFSPLTFSNFTESQAECLVQRTPIRGFHVEKRQSALVLCWQRRELIAASAWR
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.008G106000
Gossypium raimondii
Gorai.008G106000
N
0.877
TCM_005571
Theobroma cacao
TCM_005571
N
0.835
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
0.759
POPTR_0002s14550
Populus trichocarpa
POPTR_0002s14550
N
0.725
SapurV1A.0033s0490
Salix purpurea
SapurV1A.0033s0490
N
0.719
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
0.715
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
0.715
Ciclev10019083m.g
Citrus clementina
Ciclev10019083m.g
N
0.712
orange1.1g005237m.g
Citrus sinensis
orange1.1g005237m.g
N
0.712
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.711
30174.m008828
Ricinus communis
30174.m008828
N
0.706