CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_005571
(
Theobroma cacao
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
TCM_005571
T201604_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX96296
GRAS
371
729
IIDLLIQAAELIETGNLVLAQGILARLNHQLSPVGKPFIRAAFYFKEALQLLLRLNTTNNTSALSTYNMIFKIGAYKSFSEISPIVQFANFTCNQALLEVFEGCSRIHIIDFDIGYGGQWASLMQELVLRNGGAPSLKITAFSSPSTHDELELGFTQDNLKHFASEINMAFEIERMSLEALSSGSWPLPLHLPENEAIAVNLPIGCFSNYPSTLPLVLRFVKQLSPKIVVSLDRGCDRTDVSFPHHVVHALQSYSGLLESLDAVNMNLDALQKIERFLLQPGIEKIVLGRHRSLERTPPWRSLFVQSGFSPLTFSNFTESQAECLVQRTPISGFHVEKRQSSLVLCWQRRELIAASAWR
Links
Other
GRAS
family TFs
Other
Theobroma cacao
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.008G106000
Gossypium raimondii
Gorai.008G106000
N
0.891
Gorai.008G106100
Gossypium raimondii
Gorai.008G106100
N
0.835
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
0.799
POPTR_0002s14550
Populus trichocarpa
POPTR_0002s14550
N
0.785
SapurV1A.0033s0490
Salix purpurea
SapurV1A.0033s0490
N
0.781
Ciclev10019083m.g
Citrus clementina
Ciclev10019083m.g
N
0.777
orange1.1g005237m.g
Citrus sinensis
orange1.1g005237m.g
N
0.777
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
0.766
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
0.766
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.757
SapurV1A.0033s0460
Salix purpurea
SapurV1A.0033s0460
N
0.753
POPTR_0014s05940
Populus trichocarpa
POPTR_0014s05940
N
0.746
PGSC0003DMG400025973
Solanum tuberosum
PGSC0003DMG400025973
N
0.744
POPTR_0002s14500
Populus trichocarpa
POPTR_0002s14500
N
0.743
Solyc01g090950.2
Solanum lycopersicum
Solyc01g090950.2
N
0.743
30174.m008828
Ricinus communis
30174.m008828
N
0.743
Eucgr.E01510
Eucalyptus grandis
Eucgr.E01510
N
0.743
POPTR_0014s05910
Populus trichocarpa
POPTR_0014s05910
N
0.742
SapurV1A.0248s0400
Salix purpurea
SapurV1A.0248s0400
N
0.740
SapurV1A.0382s0350
Salix purpurea
SapurV1A.0382s0350
N
0.740
SapurV1A.1971s0010
Salix purpurea
SapurV1A.1971s0010
N
0.740
cassava19916.m1
Manihot esculenta
cassava19916.m1
N
0.735
PK17954.1
Cannabis sativa
PK17954.1
N
0.726
Eucgr.E01509
Eucalyptus grandis
Eucgr.E01509
N
0.710
Pm017821
Prunus mume
Pm017821
N
0.704
gene03956-v1.0-hybrid
Fragaria vesca
gene03956-v1.0-hybrid
N
0.704
MDP0000784909
Malus domestica
MDP0000784909
N
0.704
PRUPE_ppa001781mg
Prunus persica
PRUPE_ppa001781mg
N
0.701