CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK17954.1
(
Cannabis sativa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
PK17954.1
T203250_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK17954.1
GRAS
245
600
LIDQLSKAAELIETGNPVLAQGILARLNHHVSPLGKPFQRAAFYFKEALQLLLHNSLALPPFNLIFKIGAYKTFSEVSPVLQFANFTCNQAILEALEGFSRIHVIDFDIGYGGQWASFMQELALRNASAAGGSLKITAFVSPSTHEEFELGFTHENLKHFAAEINLAFELEIVSLETFNSGSWPVPLHISEDEAIAVNLPITSLSSYPLSLPLVLRFLNQLSPKVVVSLERGSDRTDVPFPHQIIHAFHSYSGLIESLDAVNVNLEALQKIEKFLLQPRIEKLVLNRYRSPETTPPWRSSFLNSGFSPAVFSNFTESQAECLVQRTPVRGFHVEKKQSSLSLCWQRKELISVSAWR
Links
Other
GRAS
family TFs
Other
Cannabis sativa
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.734
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
0.734
TCM_005571
Theobroma cacao
TCM_005571
N
0.726
MDP0000784909
Malus domestica
MDP0000784909
N
0.725
gene03956-v1.0-hybrid
Fragaria vesca
gene03956-v1.0-hybrid
N
0.724
Gorai.008G106000
Gossypium raimondii
Gorai.008G106000
N
0.722
PGSC0003DMG400025973
Solanum tuberosum
PGSC0003DMG400025973
N
0.721
Solyc01g090950.2
Solanum lycopersicum
Solyc01g090950.2
N
0.719
PRUPE_ppa001781mg
Prunus persica
PRUPE_ppa001781mg
N
0.714
Pm017821
Prunus mume
Pm017821
N
0.714
POPTR_0014s05940
Populus trichocarpa
POPTR_0014s05940
N
0.703