CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene03956-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene03956-v1.0-hybrid
T202556_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna03956.1-v1.0-hybrid
GRAS
374
733
IIDQLVNAAELIETGNPLLAQGILARLNHQLSPIGKPFQRAALYFKEALELLLNNSHSSANLSPFSLVYKIAAYKSFSEISPVLQFANFTCNQAILESVEGYNRVHVIDFDIGYGGQWASFMQEVALRNGGSPPSLKITAFVCSSVHDEFELAFTQENLKNFASELNLAFELEIVSIEALNSGSWPLPLHGSDSVAVAVNLPIGSFLNSPLSLPLVLRFVKQLSPKIVVSLERGSDRTDIPFPHQIIQALHSYSSLLESLDAVNANLDALQKIERYLLQPSIEKIVMGRHLSPKRTPTPSWRTLFLSSGFSPLTFSNFTESQAECLVQRTPVGGFHVEKRQSSLVLCWQRKDLVSASAWR
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa001781mg
Prunus persica
PRUPE_ppa001781mg
N
0.811
MDP0000784909
Malus domestica
MDP0000784909
N
0.811
Pm017821
Prunus mume
Pm017821
N
0.808
PK17954.1
Cannabis sativa
PK17954.1
N
0.724
TCM_005571
Theobroma cacao
TCM_005571
N
0.704
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.702
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
0.701
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
0.701