CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

CBG14858 *(Caenorhabditis briggsae)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	CBG14858	T205560_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ceh-54 M02188_2.00	Caenorhabditis elegans	HTAATTRVN	NBYAATTAD	PBM Weirauch et al.(2014) pTH5643	0.841	0.860
Esx1 M00424_2.00	Mus musculus	NYTAATWR	YWATTARN	PBM Berger et al.(2008) Esx1_3124	0.707	0.544
HESX1 M00309_2.00	Homo sapiens	HTAATTRGN	NCYAATTAD	PBM Barrera et al.(2016) HESX1_REF	0.614	0.491
P79681_ACIBE M02200_2.00	Acipenser baerii	DTAATTRB	VYAATTAH	PBM Weirauch et al.(2014) pTH6156	0.614	0.491
HESX1 M00307_2.00	Homo sapiens	TAATTRNN	NNYAATTA	PBM Barrera et al.(2016) HESX1_N125S	0.614	0.491
HESX1 M00308_2.00	Homo sapiens	NATAHATRN	NYATDTATN	PBM Barrera et al.(2016) HESX1_R160C	0.614	0.474
ENSCING00000016045 M02078_2.00	Ciona intestinalis	NNYTAATTRGN	NCYAATTARNN	PBM Weirauch et al.(2014) pTH6551	0.611	0.596
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
CBG14858	Homeodomain	46	102	KRNRITFDSAQIDEMEKVFAENQYPDATSRDQLASRIQLHEERVQIWFQNRRAKYRR

Links
Other Homeodomain family TFs
Other *Caenorhabditis briggsae* TFs