CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG14858
(
Caenorhabditis briggsae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CBG14858
T205560_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ceh-54
M02188_2.00
Caenorhabditis elegans
HTAATTRVN
NBYAATTAD
PBM
Weirauch et al.(2014)
pTH5643
0.841
0.860
Esx1
M00424_2.00
Mus musculus
NYTAATWR
YWATTARN
PBM
Berger et al.(2008)
Esx1_3124
0.707
0.544
HESX1
M00309_2.00
Homo sapiens
HTAATTRGN
NCYAATTAD
PBM
Barrera et al.(2016)
HESX1_REF
0.614
0.491
P79681_ACIBE
M02200_2.00
Acipenser baerii
DTAATTRB
VYAATTAH
PBM
Weirauch et al.(2014)
pTH6156
0.614
0.491
HESX1
M00307_2.00
Homo sapiens
TAATTRNN
NNYAATTA
PBM
Barrera et al.(2016)
HESX1_N125S
0.614
0.491
HESX1
M00308_2.00
Homo sapiens
NATAHATRN
NYATDTATN
PBM
Barrera et al.(2016)
HESX1_R160C
0.614
0.474
ENSCING00000016045
M02078_2.00
Ciona intestinalis
NNYTAATTRGN
NCYAATTARNN
PBM
Weirauch et al.(2014)
pTH6551
0.611
0.596
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG14858
Homeodomain
46
102
KRNRITFDSAQIDEMEKVFAENQYPDATSRDQLASRIQLHEERVQIWFQNRRAKYRR
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis briggsae
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN18011
Caenorhabditis brenneri
CBN18011
I
0.845
ceh-54
Caenorhabditis elegans
WBGene00020485
D
0.841
CRE00191
Caenorhabditis remanei
CRE00191
I
0.824
CJA11788
Caenorhabditis japonica
CJA11788
I
0.816
ENSCHOG00000002622
Choloepus hoffmanni
ENSCHOG00000002622
I
0.743
Esx1
Mus musculus
ENSMUSG00000023443
D
0.707
Esx1
Rattus norvegicus
ENSRNOG00000048011
I
0.707
ENSCAFG00000023214
Canis familiaris
ENSCAFG00000023214
I
0.702
TELCIR_13423
Teladorsagia circumcincta
TELCIR_13423
I
0.693
ML021120a
Mnemiopsis leidyi
ML021120a
I
0.691
SEBOX
Cavia porcellus
ENSCPOG00000005498
I
0.682
SEBOX
Pteropus vampyrus
ENSPVAG00000002882
I
0.682
ENSSTOG00000023781
Ictidomys tridecemlineatus
ENSSTOG00000023781
I
0.682
H311_03552
Anncaliia algerae
H311_03552
I
0.669
H311_01337
Anncaliia algerae
H311_01337
I
0.668
H311_02306
Anncaliia algerae
H311_02306
I
0.668
Sakowv30037698m.g
Saccoglossus kowalevskii
Sakowv30037698m.g
I
0.666
EDEG_02526
Edhazardia aedis
EDEG_02526
I
0.665
NERG_00545
Nematocida sp
NERG_00545
I
0.663
ENSTBEG00000007985
Tupaia belangeri
ENSTBEG00000007985
I
0.662
GB43703
Apis mellifera
GB43703
I
0.656
Minc16296
Meloidogyne incognita
Minc16296
I
0.632
CGI_10013213
Crassostrea gigas
CGI_10013213
I
0.631
CapteG99648
Capitella teleta
CapteG99648
I
0.624
Smp_000075
Schistosoma mansoni
Smp_000075
I
0.622
A_06265
Schistosoma haematobium
A_06265
I
0.622
TsM_001238800
Taenia solium
TsM_001238800
I
0.622
ENSAMXG00000004052
Astyanax mexicanus
ENSAMXG00000004052
I
0.618
csin107777
Clonorchis sinensis
csin107777
I
0.618
T265_11607
Opisthorchis viverrini
T265_11607
I
0.618
Aan_R010087
Calypte anna
Aan_R010087
I
0.616
Cmyd_10020629
Chelonia mydas
Cmyd_10020629
I
0.616
ENSACAG00000005724
Anolis carolinensis
ENSACAG00000005724
I
0.614
ENSAMEG00000011722
Ailuropoda melanoleuca
ENSAMEG00000011722
I
0.614
ENSAPLG00000005083
Anas platyrhynchos
ENSAPLG00000005083
I
0.614
HESX1
Bos taurus
ENSBTAG00000001439
I
0.614
HESX1
Canis familiaris
ENSCAFG00000007995
I
0.614
ENSCHOG00000013897
Choloepus hoffmanni
ENSCHOG00000013897
I
0.614
HESX1
Callithrix jacchus
ENSCJAG00000010981
I
0.614
HESX1
Cavia porcellus
ENSCPOG00000012741
I
0.614
ENSCSAG00000012779
Chlorocebus sabaeus
ENSCSAG00000012779
I
0.614
HESX1
Dasypus novemcinctus
ENSDNOG00000003677
I
0.614
HESX1
Equus caballus
ENSECAG00000007740
I
0.614
ENSFALG00000008487
Ficedula albicollis
ENSFALG00000008487
I
0.614
HESX1
Felis catus
ENSFCAG00000024266
I
0.614
HESX1
Homo sapiens
ENSG00000163666
D
0.614
HESX1
Gallus gallus
ENSGALG00000005506
I
0.614
HESX1
Gorilla gorilla
ENSGGOG00000006213
I
0.614
ENSLACG00000011013
Latimeria chalumnae
ENSLACG00000011013
I
0.614
HESX1
Loxodonta africana
ENSLAFG00000032415
I
0.614
ENSLOCG00000013317
Lepisosteus oculatus
ENSLOCG00000013317
I
0.614
HESX1
Meleagris gallopavo
ENSMGAG00000006238
I
0.614
HESX1
Myotis lucifugus
ENSMLUG00000008636
I
0.614
HESX1
Macaca mulatta
ENSMMUG00000007224
I
0.614
HESX1
Monodelphis domestica
ENSMODG00000012324
I
0.614
ENSMPUG00000016854
Mustela putorius furo
ENSMPUG00000016854
I
0.614
ENSMPUG00000018366
Mustela putorius furo
ENSMPUG00000018366
I
0.614
ENSMPUG00000018780
Mustela putorius furo
ENSMPUG00000018780
I
0.614
ENSNLEG00000007255
Nomascus leucogenys
ENSNLEG00000007255
I
0.614
HESX1
Ornithorhynchus anatinus
ENSOANG00000015103
I
0.614
ENSOARG00000014637
Ovis aries
ENSOARG00000014637
I
0.614
HESX1
Otolemur garnettii
ENSOGAG00000031045
I
0.614
HESX1
Ochotona princeps
ENSOPRG00000005159
I
0.614
ENSPANG00000023827
Papio anubis
ENSPANG00000023827
I
0.614
HESX1
Procavia capensis
ENSPCAG00000003678
I
0.614
ENSPPYG00000013775
Pongo abelii
ENSPPYG00000013775
I
0.614
ENSPSIG00000007922
Pelodiscus sinensis
ENSPSIG00000007922
I
0.614
HESX1
Pan troglodytes
ENSPTRG00000015044
I
0.614
HESX1
Pteropus vampyrus
ENSPVAG00000013347
I
0.614
HESX1
Sorex araneus
ENSSARG00000004783
I
0.614
ENSSHAG00000012478
Sarcophilus harrisii
ENSSHAG00000012478
I
0.614
HESX1
Sus scrofa
ENSSSCG00000021207
I
0.614
ENSSTOG00000000375
Ictidomys tridecemlineatus
ENSSTOG00000000375
I
0.614
HESX1
Tupaia belangeri
ENSTBEG00000017505
I
0.614
HESX1
Taeniopygia guttata
ENSTGUG00000007186
I
0.614
HESX1
Tursiops truncatus
ENSTTRG00000009140
I
0.614
Afo_R011795
Aptenodytes forsteri
Afo_R011795
I
0.614
Alligator_sinensis_CCG003505.1
Alligator sinensis
Alligator_sinensis_CCG003505.1
I
0.614
Brh_R006162
Buceros rhinoceros
Brh_R006162
I
0.614
ENSBTAP00000001886-D1
Bos grunniens
ENSBTAP00000001886-D1
I
0.614
ENSP00000419615
Macaca fascicularis
ENSP00000419615
I
0.614
Gfo_R015056
Geospiza fortis
Gfo_R015056
I
0.614
Pvit_14185
Pogona vitticeps
Pvit_14185
I
0.614
Tal_R005145
Tyto alba
Tal_R005145
I
0.614
P79681_ACIBE
Acipenser baerii
P79681_ACIBE
D
0.614
CAA49768
Xenopus laevis
CAA49768
I
0.614
hesx1
Xenopus tropicalis
XB-GENE-483193
I
0.614
hesx1.S
Xenopus laevis
XB-GENE-6252654
I
0.614
hesx1.L
Xenopus laevis
XB-GENE-864952
I
0.614
ENSACAG00000026013
Anolis carolinensis
ENSACAG00000026013
I
0.612
CDX4
Callithrix jacchus
ENSCJAG00000011367
I
0.612
ENSCING00000016045
Ciona intestinalis
ENSCING00000016045
D
0.611
ENSCSAVG00000011699
Ciona savignyi
ENSCSAVG00000011699
I
0.611
NEMVEDRAFT_v1g68616
Nematostella vectensis
NEMVEDRAFT_v1g68616
I
0.610
estExt_GenewiseH_1.C_4210013
Branchiostoma floridae
estExt_GenewiseH_1.C_4210013
I
0.610
estExt_gwp.C_780115
Branchiostoma floridae
estExt_gwp.C_780115
I
0.610
AALB009250
Anopheles albimanus
AALB009250
I
0.610
CapteG109027
Capitella teleta
CapteG109027
I
0.609
CapteG29885
Capitella teleta
CapteG29885
I
0.609
NEMVEDRAFT_v1g192469
Nematostella vectensis
NEMVEDRAFT_v1g192469
I
0.605
GLOINDRAFT_4254
Rhizophagus irregularis
GLOINDRAFT_4254
I
0.604
csin111676
Clonorchis sinensis
csin111676
I
0.603
T265_03777
Opisthorchis viverrini
T265_03777
I
0.603
Aqu1.218592
Amphimedon queenslandica
Aqu1.218592
I
0.602
BOTBODRAFT_45725
Botryobasidium botryosum
BOTBODRAFT_45725
I
0.601
ENSAMXG00000014772
Astyanax mexicanus
ENSAMXG00000014772
I
0.601
CapteG30032
Capitella teleta
CapteG30032
I
0.600
CORT_0B02840
Candida orthopsilosis
CORT_0B02840
I
0.599