Sakowv30037698m.g (Saccoglossus kowalevskii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Sakowv30037698m.g T227972_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Esx1
M00424_2.00 		Mus musculus
NYTAATWR
YWATTARN		 PBM
Berger et al.(2008)
Esx1_3124 		0.688 0.456
ceh-54
M02188_2.00 		Caenorhabditis elegans
HTAATTRVN
NBYAATTAD		 PBM
Weirauch et al.(2014)
pTH5643 		0.669 0.491
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23943751_peptide Homeodomain 74 130
23943752_peptide Homeodomain 74 130

Links

Other Homeodomain family TFs
Other Saccoglossus kowalevskii TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30037696m.g Saccoglossus kowalevskii Sakowv30037696m.g I 0.715
ENSCAFG00000023214 Canis familiaris ENSCAFG00000023214 I 0.692
Esx1 Mus musculus ENSMUSG00000023443 D 0.688
Esx1 Rattus norvegicus ENSRNOG00000048011 I 0.688
ML021120a Mnemiopsis leidyi ML021120a I 0.682
TELCIR_13423 Teladorsagia circumcincta TELCIR_13423 I 0.674
CBN18011 Caenorhabditis brenneri CBN18011 I 0.669
CJA11788 Caenorhabditis japonica CJA11788 I 0.669
ceh-54 Caenorhabditis elegans WBGene00020485 D 0.669
SEBOX Cavia porcellus ENSCPOG00000005498 I 0.668
SEBOX Pteropus vampyrus ENSPVAG00000002882 I 0.668
ENSSTOG00000023781 Ictidomys tridecemlineatus ENSSTOG00000023781 I 0.668
CBG14858 Caenorhabditis briggsae CBG14858 I 0.666
CGI_10013213 Crassostrea gigas CGI_10013213 I 0.653
CRE00191 Caenorhabditis remanei CRE00191 I 0.653
ENSTBEG00000007985 Tupaia belangeri ENSTBEG00000007985 I 0.647
Sakowv30037697m.g Saccoglossus kowalevskii Sakowv30037697m.g I 0.642
H311_01337 Anncaliia algerae H311_01337 I 0.639
H311_02306 Anncaliia algerae H311_02306 I 0.639
CaO19.11483 Candida albicans CaO19.11483 I 0.629
CD36_54680 Candida dubliniensis CD36_54680 I 0.629
EDEG_02526 Edhazardia aedis EDEG_02526 I 0.629
ENSCHOG00000002622 Choloepus hoffmanni ENSCHOG00000002622 I 0.628
CORT_0B02840 Candida orthopsilosis CORT_0B02840 I 0.619
ENSACAG00000006408 Anolis carolinensis ENSACAG00000006408 I 0.611
TriadG60748 Trichoplax adhaerens TriadG60748 I 0.610
GLOINDRAFT_4254 Rhizophagus irregularis GLOINDRAFT_4254 I 0.606
TriadG51739 Trichoplax adhaerens TriadG51739 I 0.603
GB43703 Apis mellifera GB43703 I 0.600