CBN18011 (Caenorhabditis brenneri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CBN18011 T205698_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ceh-54
M02188_2.00 		Caenorhabditis elegans
HTAATTRVN
NBYAATTAD		 PBM
Weirauch et al.(2014)
pTH5643 		0.851 0.825
Esx1
M00424_2.00 		Mus musculus
NYTAATWR
YWATTARN		 PBM
Berger et al.(2008)
Esx1_3124 		0.695 0.561
P79681_ACIBE
M02200_2.00 		Acipenser baerii
DTAATTRB
VYAATTAH		 PBM
Weirauch et al.(2014)
pTH6156 		0.628 0.579
HESX1
M00309_2.00 		Homo sapiens
HTAATTRGN
NCYAATTAD		 PBM
Barrera et al.(2016)
HESX1_REF 		0.628 0.544
HESX1
M00307_2.00 		Homo sapiens
TAATTRNN
NNYAATTA		 PBM
Barrera et al.(2016)
HESX1_N125S 		0.628 0.544
HESX1
M00308_2.00 		Homo sapiens
NATAHATRN
NYATDTATN		 PBM
Barrera et al.(2016)
HESX1_R160C 		0.628 0.526
ENSCING00000016045
M02078_2.00 		Ciona intestinalis
NNYTAATTRGN
NCYAATTARNN		 PBM
Weirauch et al.(2014)
pTH6551 		0.611 0.614
HESX1
M00306_2.00 		Homo sapiens
WRATDRNN
NNYHATYW		 PBM
Barrera et al.(2016)
HESX1_E149K 		0.607 0.526
NEMVEDRAFT_v1g105595
M02143_2.00 		Nematostella vectensis
NTWATWRN
NYWATWAN		 PBM
Weirauch et al.(2014)
pTH5503 		0.599 0.561
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN18011 Homeodomain 46 102

Links

Other Homeodomain family TFs
Other Caenorhabditis brenneri TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ceh-54 Caenorhabditis elegans WBGene00020485 D 0.851
CBG14858 Caenorhabditis briggsae CBG14858 I 0.845
CRE00191 Caenorhabditis remanei CRE00191 I 0.839
CJA11788 Caenorhabditis japonica CJA11788 I 0.802
ENSCHOG00000002622 Choloepus hoffmanni ENSCHOG00000002622 I 0.757
Esx1 Mus musculus ENSMUSG00000023443 D 0.695
Esx1 Rattus norvegicus ENSRNOG00000048011 I 0.695
ML021120a Mnemiopsis leidyi ML021120a I 0.692
ENSCAFG00000023214 Canis familiaris ENSCAFG00000023214 I 0.690
SEBOX Cavia porcellus ENSCPOG00000005498 I 0.682
SEBOX Pteropus vampyrus ENSPVAG00000002882 I 0.682
ENSSTOG00000023781 Ictidomys tridecemlineatus ENSSTOG00000023781 I 0.682
H311_03552 Anncaliia algerae H311_03552 I 0.681
TELCIR_13423 Teladorsagia circumcincta TELCIR_13423 I 0.681
Sakowv30037698m.g Saccoglossus kowalevskii Sakowv30037698m.g I 0.669
H311_01337 Anncaliia algerae H311_01337 I 0.668
H311_02306 Anncaliia algerae H311_02306 I 0.668
NERG_00545 Nematocida sp NERG_00545 I 0.667
EDEG_02526 Edhazardia aedis EDEG_02526 I 0.666
ENSTBEG00000007985 Tupaia belangeri ENSTBEG00000007985 I 0.662
GB43703 Apis mellifera GB43703 I 0.652
CGI_10013213 Crassostrea gigas CGI_10013213 I 0.644
ENSACAG00000005724 Anolis carolinensis ENSACAG00000005724 I 0.628
ENSAMEG00000011722 Ailuropoda melanoleuca ENSAMEG00000011722 I 0.628
ENSAMXG00000004052 Astyanax mexicanus ENSAMXG00000004052 I 0.628
ENSAPLG00000005083 Anas platyrhynchos ENSAPLG00000005083 I 0.628
HESX1 Bos taurus ENSBTAG00000001439 I 0.628
HESX1 Canis familiaris ENSCAFG00000007995 I 0.628
ENSCHOG00000013897 Choloepus hoffmanni ENSCHOG00000013897 I 0.628
HESX1 Callithrix jacchus ENSCJAG00000010981 I 0.628
HESX1 Cavia porcellus ENSCPOG00000012741 I 0.628
ENSCSAG00000012779 Chlorocebus sabaeus ENSCSAG00000012779 I 0.628
HESX1 Dasypus novemcinctus ENSDNOG00000003677 I 0.628
HESX1 Equus caballus ENSECAG00000007740 I 0.628
ENSFALG00000008487 Ficedula albicollis ENSFALG00000008487 I 0.628
HESX1 Felis catus ENSFCAG00000024266 I 0.628
HESX1 Homo sapiens ENSG00000163666 D 0.628
HESX1 Gallus gallus ENSGALG00000005506 I 0.628
HESX1 Gorilla gorilla ENSGGOG00000006213 I 0.628
ENSLACG00000011013 Latimeria chalumnae ENSLACG00000011013 I 0.628
HESX1 Loxodonta africana ENSLAFG00000032415 I 0.628
ENSLOCG00000013317 Lepisosteus oculatus ENSLOCG00000013317 I 0.628
HESX1 Meleagris gallopavo ENSMGAG00000006238 I 0.628
HESX1 Myotis lucifugus ENSMLUG00000008636 I 0.628
HESX1 Macaca mulatta ENSMMUG00000007224 I 0.628
HESX1 Monodelphis domestica ENSMODG00000012324 I 0.628
ENSMPUG00000016854 Mustela putorius furo ENSMPUG00000016854 I 0.628
ENSMPUG00000018366 Mustela putorius furo ENSMPUG00000018366 I 0.628
ENSMPUG00000018780 Mustela putorius furo ENSMPUG00000018780 I 0.628
ENSNLEG00000007255 Nomascus leucogenys ENSNLEG00000007255 I 0.628
HESX1 Ornithorhynchus anatinus ENSOANG00000015103 I 0.628
ENSOARG00000014637 Ovis aries ENSOARG00000014637 I 0.628
HESX1 Otolemur garnettii ENSOGAG00000031045 I 0.628
HESX1 Ochotona princeps ENSOPRG00000005159 I 0.628
ENSPANG00000023827 Papio anubis ENSPANG00000023827 I 0.628
HESX1 Procavia capensis ENSPCAG00000003678 I 0.628
ENSPPYG00000013775 Pongo abelii ENSPPYG00000013775 I 0.628
ENSPSIG00000007922 Pelodiscus sinensis ENSPSIG00000007922 I 0.628
HESX1 Pan troglodytes ENSPTRG00000015044 I 0.628
HESX1 Pteropus vampyrus ENSPVAG00000013347 I 0.628
HESX1 Sorex araneus ENSSARG00000004783 I 0.628
ENSSHAG00000012478 Sarcophilus harrisii ENSSHAG00000012478 I 0.628
HESX1 Sus scrofa ENSSSCG00000021207 I 0.628
ENSSTOG00000000375 Ictidomys tridecemlineatus ENSSTOG00000000375 I 0.628
HESX1 Tupaia belangeri ENSTBEG00000017505 I 0.628
HESX1 Taeniopygia guttata ENSTGUG00000007186 I 0.628
HESX1 Tursiops truncatus ENSTTRG00000009140 I 0.628
Afo_R011795 Aptenodytes forsteri Afo_R011795 I 0.628
Alligator_sinensis_CCG003505.1 Alligator sinensis Alligator_sinensis_CCG003505.1 I 0.628
Brh_R006162 Buceros rhinoceros Brh_R006162 I 0.628
ENSBTAP00000001886-D1 Bos grunniens ENSBTAP00000001886-D1 I 0.628
ENSP00000419615 Macaca fascicularis ENSP00000419615 I 0.628
Gfo_R015056 Geospiza fortis Gfo_R015056 I 0.628
Pvit_14185 Pogona vitticeps Pvit_14185 I 0.628
Tal_R005145 Tyto alba Tal_R005145 I 0.628
P79681_ACIBE Acipenser baerii P79681_ACIBE D 0.628
CAA49768 Xenopus laevis CAA49768 I 0.628
hesx1 Xenopus tropicalis XB-GENE-483193 I 0.628
hesx1.S Xenopus laevis XB-GENE-6252654 I 0.628
hesx1.L Xenopus laevis XB-GENE-864952 I 0.628
Aan_R010087 Calypte anna Aan_R010087 I 0.626
Cmyd_10020629 Chelonia mydas Cmyd_10020629 I 0.626
Smp_000075 Schistosoma mansoni Smp_000075 I 0.622
estExt_GenewiseH_1.C_4210013 Branchiostoma floridae estExt_GenewiseH_1.C_4210013 I 0.622
estExt_gwp.C_780115 Branchiostoma floridae estExt_gwp.C_780115 I 0.622
A_06265 Schistosoma haematobium A_06265 I 0.622
Minc16296 Meloidogyne incognita Minc16296 I 0.620
CapteG29885 Capitella teleta CapteG29885 I 0.617
GLOINDRAFT_4254 Rhizophagus irregularis GLOINDRAFT_4254 I 0.616
CapteG99648 Capitella teleta CapteG99648 I 0.612
ENSACAG00000026013 Anolis carolinensis ENSACAG00000026013 I 0.612
CDX4 Callithrix jacchus ENSCJAG00000011367 I 0.612
CORT_0B02840 Candida orthopsilosis CORT_0B02840 I 0.611
ENSCING00000016045 Ciona intestinalis ENSCING00000016045 D 0.611
ENSCSAVG00000011699 Ciona savignyi ENSCSAVG00000011699 I 0.611
TsM_001238800 Taenia solium TsM_001238800 I 0.611
NEMVEDRAFT_v1g68616 Nematostella vectensis NEMVEDRAFT_v1g68616 I 0.610
TriadG60748 Trichoplax adhaerens TriadG60748 I 0.610
CapteG109027 Capitella teleta CapteG109027 I 0.609
AALB009250 Anopheles albimanus AALB009250 I 0.606
csin107777 Clonorchis sinensis csin107777 I 0.606
RSKR_0000979300 Rhabditophanes kr3021 RSKR_0000979300 I 0.606
scaffold258-EXSNAP2012.18 Pristionchus exspectatus scaffold258-EXSNAP2012.18 I 0.606
T265_11607 Opisthorchis viverrini T265_11607 I 0.606
BOTBODRAFT_45725 Botryobasidium botryosum BOTBODRAFT_45725 I 0.605
NEMVEDRAFT_v1g192469 Nematostella vectensis NEMVEDRAFT_v1g192469 I 0.605
BXY_1075500 Bursaphelenchus xylophilus BXY_1075500 I 0.604
csin111676 Clonorchis sinensis csin111676 I 0.603
T265_03777 Opisthorchis viverrini T265_03777 I 0.603
Sakowv30018456m.g Saccoglossus kowalevskii Sakowv30018456m.g I 0.602
NEMVEDRAFT_v1g110792 Nematostella vectensis NEMVEDRAFT_v1g110792 I 0.601
LCUP017283 Lucilia cuprina LCUP017283 I 0.601
MDOA000990 Musca domestica MDOA000990 I 0.601
MDOA003070 Musca domestica MDOA003070 I 0.601
CGI_10015407 Crassostrea gigas CGI_10015407 I 0.600
NEMVEDRAFT_v1g105595 Nematostella vectensis NEMVEDRAFT_v1g105595 D 0.599