HOXD1 (Pteropus vampyrus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPVAG00000017425 T215309_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.664 0.389
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.664 0.389
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.664 0.389
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.640 0.361
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.640 0.361
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.640 0.361
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.640 0.361
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.640 0.361
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.640 0.361
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.640 0.361
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.640 0.361
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.640 0.361
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000016436 Homeodomain 224 259

Links

Other Homeodomain family TFs
Other Pteropus vampyrus TFs

1141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001375 Aedes aegypti AAEL001375 I 0.000
AALB005039 Anopheles albimanus AALB005039 I 0.000
AARA007412 Anopheles arabiensis AARA007412 I 0.000
AATE005175 Anopheles atroparvus AATE005175 I 0.000
ACAC_0000909201 Angiostrongylus cantonensis ACAC_0000909201 I 0.000
ACHR003797 Anopheles christyi ACHR003797 I 0.000
ACOC_0000576201 Angiostrongylus costaricensis ACOC_0000576201 I 0.000
ACOM024661 Anopheles coluzzii ACOM024661 I 0.000
ACUA007180 Anopheles culicifacies ACUA007180 I 0.000
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I 0.000
ADIR008587 Anopheles dirus ADIR008587 I 0.000
AEPI000589 Anopheles epiroticus AEPI000589 I 0.000
AFAF015865 Anopheles farauti AFAF015865 I 0.000
AFUN005441 Anopheles funestus AFUN005441 I 0.000
AGAP006108 Anopheles gambiae AGAP006108 I 0.000
AMEC011905 Anopheles melas AMEC011905 I 0.000
AMEM010049 Anopheles merus AMEM010049 I 0.000
AMIN009954 Anopheles minimus AMIN009954 I 0.000
ANCCAN_14498 Ancylostoma caninum ANCCAN_14498 I 0.000
ANCCEY_03875 Ancylostoma ceylanicum ANCCEY_03875 I 0.000
ANCDUO_02786 Ancylostoma duodenale ANCDUO_02786 I 0.000
AQUA011660 Anopheles quadriannulatus AQUA011660 I 0.000
ASIS019575 Anopheles sinensis ASIS019575 I 0.000
ASTEI02878 Anopheles stephensi ASTEI02878 I 0.000
A_06056 Schistosoma haematobium A_06056 I 0.000
CBG02981 Caenorhabditis briggsae CBG02981 I 0.000
CBN16711 Caenorhabditis brenneri CBN16711 I 0.000
CJA05984 Caenorhabditis japonica CJA05984 I 0.000
CLEC013417 Cimex lectularius CLEC013417 I 0.000
CRE01789 Caenorhabditis remanei CRE01789 I 0.000
csin111107 Clonorchis sinensis csin111107 I 0.000
D915_00091 Fasciola hepatica D915_00091 I 0.000
D915_16078 Fasciola hepatica D915_16078 N 0.000
D918_04890 Trichuris suis D918_04890 I 0.000
DAPPUDRAFT_311200 Daphnia pulex DAPPUDRAFT_311200 I 0.000
DICVIV_10680 Dictyocaulus viviparus DICVIV_10680 I 0.000
ECPE_0000786301 Echinostoma caproni ECPE_0000786301 I 0.000
ECPE_0001391101 Echinostoma caproni ECPE_0001391101 I 0.000
yps Drosophila melanogaster FBgn0022959 I 0.000
GF10852 Drosophila ananassae FBgn0087892 I 0.000
GH16919 Drosophila grimshawi FBgn0124390 I 0.000
GI13673 Drosophila mojavensis FBgn0136428 I 0.000
GL15684 Drosophila persimilis FBgn0153288 I 0.000
GM24682 Drosophila sechellia FBgn0179545 I 0.000
GD12750 Drosophila simulans FBgn0184477 I 0.000
GJ14010 Drosophila virilis FBgn0201228 I 0.000
GK16710 Drosophila willistoni FBgn0218712 I 0.000
GE20150 Drosophila yakuba FBgn0237472 I 0.000
GA23502 Drosophila pseudoobscura FBgn0244903 I 0.000
genemark-nMf.1.1.scaf00296-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00296-processed-gene-0.4 I 0.000
Hba_02103 Heterorhabditis bacteriophora Hba_02103 I 0.000
HCOI01877200 Haemonchus contortus HCOI01877200 I 0.000
HMEL008461 Heliconius melpomene HMEL008461 I 0.000
HPBE_0000695301 Heligmosomoides bakeri HPBE_0000695301 I 0.000
HPLM_0000375501 Haemonchus placei HPLM_0000375501 I 0.000
ISCW005281 Ixodes scapularis ISCW005281 I 0.000
LLOJ009520 Lutzomyia longipalpis LLOJ009520 I 0.000
MCOS_0000610701 Mesocestoides corti MCOS_0000610701 N 0.000
MhA1_Contig2458.frz3.gene1 Meloidogyne hapla MhA1_Contig2458.frz3.gene1 I 0.000
Minc12652 Meloidogyne incognita Minc12652 I 0.000
NBR_0000795701 Nippostrongylus brasiliensis NBR_0000795701 I 0.000
NECAME_15956 Necator americanus NECAME_15956 I 0.000
OESDEN_18169 Oesophagostomum dentatum OESDEN_18169 I 0.000
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.000
SCUD_0000012301 Schistosoma curassoni SCUD_0000012301 I 0.000
SCUD_0000800101 Schistosoma curassoni SCUD_0000800101 I 0.000
Sjc_0026800 Schistosoma japonicum Sjc_0026800 I 0.000
Smp_097750 Schistosoma mansoni Smp_097750 D 0.000
Smp_097800 Schistosoma mansoni Smp_097800 I 0.000
SMRZ_0001938001 Schistosoma margrebowiei SMRZ_0001938001 I 0.000
SMTD_0000035001 Schistosoma mattheei SMTD_0000035001 I 0.000
SMTD_0001373001 Schistosoma mattheei SMTD_0001373001 I 0.000
SMU15014702 Schmidtea mediterranea SMU15014702 I 0.000
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.000
SROB_0000030901 Schistosoma rodhaini SROB_0000030901 I 0.000
SROB_0000337801 Schistosoma rodhaini SROB_0000337801 I 0.000
SVUK_0001307901 Strongylus vulgaris SVUK_0001307901 I 0.000
T265_06248 Opisthorchis viverrini T265_06248 I 0.000
T265_14198 Opisthorchis viverrini T265_14198 I 0.000
TELCIR_06115 Teladorsagia circumcincta TELCIR_06115 I 0.000
TMUE_s0011007500 Trichuris muris TMUE_s0011007500 I 0.000
TRE_0000129901 Trichobilharzia regenti TRE_0000129901 I 0.000
TRE_0000940901 Trichobilharzia regenti TRE_0000940901 I 0.000
TRE_0001884901 Trichobilharzia regenti TRE_0001884901 I 0.000
TTRE_0000405201 Trichuris trichiura TTRE_0000405201 I 0.000
cey-1 Caenorhabditis elegans WBGene00000472 D 0.000