GRMZM2G061101 (Zea mays)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GRMZM2G061101 T218976_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.728 0.654
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.728 0.633
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.728 0.612
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.728 0.612
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.686 0.857
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.651 0.510
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.642 0.449
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.642 0.449
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.642 0.449
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.629 0.423
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.608 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G061101_P01 Homeodomain 253 304
GRMZM2G061101_P02 Homeodomain 105 159

Links

Other Homeodomain family TFs
Other Zea mays TFs

1228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB000327 Anopheles albimanus AALB000327 I 0.000
Aan_R000006 Calypte anna Aan_R000006 I 0.000
AARA005138 Anopheles arabiensis AARA005138 I 0.000
ACEP22182 Atta cephalotes ACEP22182 I 0.000
ACEP26487 Atta cephalotes ACEP26487 I 0.000
ACHR004287 Anopheles christyi ACHR004287 I 0.000
ADIR001763 Anopheles dirus ADIR001763 I 0.000
ADIR006768 Anopheles dirus ADIR006768 I 0.000
AEPI004828 Anopheles epiroticus AEPI004828 I 0.000
AEPI004981 Anopheles epiroticus AEPI004981 I 0.000
Afo_R008451 Aptenodytes forsteri Afo_R008451 I 0.000
AFUN001295 Anopheles funestus AFUN001295 I 0.000
AMAM009154 Anopheles maculatus AMAM009154 I 0.000
AMEC016887 Anopheles melas AMEC016887 I 0.000
AMIN006279 Anopheles minimus AMIN006279 I 0.000
ANCDUO_09759 Ancylostoma duodenale ANCDUO_09759 I 0.000
AQUA000678 Anopheles quadriannulatus AQUA000678 I 0.000
BGLB001705 Biomphalaria glabrata BGLB001705 I 0.000
BGLB005976 Biomphalaria glabrata BGLB005976 I 0.000
CGOC_0000387301 Cylicostephanus goldi CGOC_0000387301 I 0.000
D918_03762 Trichuris suis D918_03762 N 0.000
EFV59137 Trichinella spiralis EFV59137 N 0.000
ENSACAG00000012070 Anolis carolinensis ENSACAG00000012070 I 0.000
ENSCING00000013809 Ciona intestinalis ENSCING00000013809 I 0.000
Hmbox1 Dipodomys ordii ENSDORG00000015971 N 0.000
HNF1A Homo sapiens ENSG00000135100 D 0.000
HMBOX1 Homo sapiens ENSG00000147421 D 0.000
ENSLACG00000003225 Latimeria chalumnae ENSLACG00000003225 N 0.000
ENSLOCG00000004905 Lepisosteus oculatus ENSLOCG00000004905 I 0.000
ENSMEUG00000002781 Macropus eugenii ENSMEUG00000002781 I 0.000
ENSMICG00000004221 Microcebus murinus ENSMICG00000004221 I 0.000
HMBOX1 Microcebus murinus ENSMICG00000010422 N 0.000
Hmbox1 Mus musculus ENSMUSG00000021972 D 0.000
Hnf1a Mus musculus ENSMUSG00000029556 D 0.000
Crx Mus musculus ENSMUSG00000041578 D 0.000
ENSOANG00000030226 Ornithorhynchus anatinus ENSOANG00000030226 I 0.000
ENSOANG00000031547 Ornithorhynchus anatinus ENSOANG00000031547 I 0.000
ENSPFOG00000024055 Poecilia formosa ENSPFOG00000024055 I 0.000
HMBOX1 Sorex araneus ENSSARG00000009365 N 0.000
ENSTBEG00000005238 Tupaia belangeri ENSTBEG00000005238 I 0.000
HMBOX1 Tupaia belangeri ENSTBEG00000016300 I 0.000
ENSXMAG00000020166 Xiphophorus maculatus ENSXMAG00000020166 I 0.000
e_gw.814.10.1 Branchiostoma floridae e_gw.814.10.1 I 0.000
GB40331 Apis mellifera GB40331 I 0.000
GB42226 Apis mellifera GB42226 I 0.000
genemark-nMf.1.1.scaf05885-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf05885-processed-gene-0.2 I 0.000
ISCW005275 Ixodes scapularis ISCW005275 I 0.000
ISCW017713 Ixodes scapularis ISCW017713 I 0.000
L893_g29073 Steinernema glaseri L893_g29073 I 0.000
LDEC010767 Leptinotarsa decemlineata LDEC010767 I 0.000
maker-nMf.1.1.scaf06360-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf06360-augustus-gene-0.6 I 0.000
maker-nMf.1.1.scaf10679-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf10679-snap-gene-0.4 I 0.000
MESCA003695 Megaselia scalaris MESCA003695 I 0.000
MESCA004913 Megaselia scalaris MESCA004913 N 0.000
MhA1_Contig1070.frz3.gene23 Meloidogyne hapla MhA1_Contig1070.frz3.gene23 I 0.000
MhA1_Contig878.frz3.gene2 Meloidogyne hapla MhA1_Contig878.frz3.gene2 I 0.000
Ogr07758 Ophisaurus gracilis Ogr07758 N 0.000
PXEA_0000709901 Protopolystoma xenopodis PXEA_0000709901 I 0.000
SINV23302 Solenopsis invicta SINV23302 I 0.000
SPU_008196 Strongylocentrotus purpuratus SPU_008196 N 0.000
SROB_0000568701 Schistosoma rodhaini SROB_0000568701 I 0.000
SVUK_0000982701 Strongylus vulgaris SVUK_0000982701 I 0.000
TTRE_0000607501 Trichuris trichiura TTRE_0000607501 N 0.000