CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000607501
(
Trichuris trichiura
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
TTRE_0000607501
T237185_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000607501
Homeodomain
256
300
RRERFSFKQQHINVLEHYFKAEPYPNVYMRKEIATACNHELQRCQ
Links
Other
Homeodomain
family TFs
Other
Trichuris trichiura
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D918_03762
Trichuris suis
D918_03762
N
0.867
EFV59137
Trichinella spiralis
EFV59137
N
0.815
HNF1A
Homo sapiens
ENSG00000135100
D
0.709
HMBOX1
Ochotona princeps
ENSOPRG00000013613
N
0.709
Ogr07758
Ophisaurus gracilis
Ogr07758
N
0.709
Hmbox1
Dipodomys ordii
ENSDORG00000015971
N
0.688
HMBOX1
Homo sapiens
ENSG00000147421
D
0.688
ENSLACG00000003225
Latimeria chalumnae
ENSLACG00000003225
N
0.688
HMBOX1
Microcebus murinus
ENSMICG00000010422
N
0.688
Hmbox1
Mus musculus
ENSMUSG00000021972
D
0.688
Hnf1a
Mus musculus
ENSMUSG00000029556
D
0.688
HMBOX1
Sorex araneus
ENSSARG00000009365
N
0.688
SPU_008196
Strongylocentrotus purpuratus
SPU_008196
N
0.688
MTR_1g105425
Medicago truncatula
MTR_1g105425
N
0.640
PEQ_0000256101
Parascaris equorum
PEQ_0000256101
N
0.635
HmN_000399900
Hymenolepis microstoma
HmN_000399900
N
0.628
pax6a
Danio rerio
ENSDARG00000103379
I
0.620
bcd
Drosophila persimilis
FBgn0044482
I
0.615
T265_14910
Opisthorchis viverrini
T265_14910
I
0.615
GPLIN_001485000
Globodera pallida
GPLIN_001485000
I
0.612
Afo_R008309
Aptenodytes forsteri
Afo_R008309
I
0.605
Brh_R009027
Buceros rhinoceros
Brh_R009027
I
0.605
Tal_R010888
Tyto alba
Tal_R010888
I
0.605
L893_g32186
Steinernema glaseri
L893_g32186
N
0.605
ENSCHOG00000011497
Choloepus hoffmanni
ENSCHOG00000011497
I
0.603
ACEP22182
Atta cephalotes
ACEP22182
I
0.601