CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_06729
(
Phaeosphaeria nodorum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SNOG_06729
T223521_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_06729
Homeodomain
28
72
VKPRLTKEQHDVLEQHFQQQHKPSTLVKKDFATRLGVPLDKINVR
SNOT_06729
Homeodomain
82
98
RMEQVNWFQNRRAKVKQ
Links
Other
Homeodomain
family TFs
Other
Phaeosphaeria nodorum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HAT
Arabidopsis thaliana
AT3G42170
N
0.000
BGIOSGA018468
Oryza indica
BGIOSGA018468
N
0.000
BGIOSGA020445
Oryza indica
BGIOSGA020445
N
0.000
Bostr.0556s0643
Boechera stricta
Bostr.0556s0643
N
0.000
BRADI1G09650
Brachypodium distachyon
BRADI1G09650
N
0.000
BRADI1G09660
Brachypodium distachyon
BRADI1G09660
N
0.000
BRADI3G16050
Brachypodium distachyon
BRADI3G16050
N
0.000
BRADI3G40810
Brachypodium distachyon
BRADI3G40810
N
0.000
Ciclev10007308m.g
Citrus clementina
Ciclev10007308m.g
N
0.000
Eucgr.C01383
Eucalyptus grandis
Eucgr.C01383
N
0.000
gene30791-v1.0-hybrid
Fragaria vesca
gene30791-v1.0-hybrid
N
0.000
gene31107-v1.0-hybrid
Fragaria vesca
gene31107-v1.0-hybrid
N
0.000
GLYMA13G22855
Glycine max
GLYMA13G22855
N
0.000
GLYMA13G22881
Glycine max
GLYMA13G22881
N
0.000
GLYMA16G32921
Glycine max
GLYMA16G32921
N
0.000
GLYMA17G11981
Glycine max
GLYMA17G11981
N
0.000
GSMUA_Achr10G16260_001
Musa acuminata
GSMUA_Achr10G16260_001
N
0.000
GSMUA_Achr3G02770_001
Musa acuminata
GSMUA_Achr3G02770_001
N
0.000
GSMUA_Achr3G16690_001
Musa acuminata
GSMUA_Achr3G16690_001
N
0.000
GSMUA_Achr8G29120_001
Musa acuminata
GSMUA_Achr8G29120_001
N
0.000
Lus10032337.g
Linum usitatissimum
Lus10032337.g
N
0.000
MDP0000394762
Malus domestica
MDP0000394762
N
0.000
mgf025287m
Mimulus guttatus
mgf025287m
N
0.000
MLOC_66012
Hordeum vulgare
MLOC_66012
N
0.000
MLOC_75540
Hordeum vulgare
MLOC_75540
N
0.000
OB03G40190
Oryza brachyantha
OB03G40190
N
0.000
OB08G27840
Oryza brachyantha
OB08G27840
N
0.000
OB08G27850
Oryza brachyantha
OB08G27850
N
0.000
orange1.1g002915m.g
Citrus sinensis
orange1.1g002915m.g
N
0.000
ORGLA03G0300400
Oryza glaberrima
ORGLA03G0300400
N
0.000
ORGLA05G0072400
Oryza glaberrima
ORGLA05G0072400
N
0.000
ORGLA05G0236800
Oryza glaberrima
ORGLA05G0236800
N
0.000
ORGLA05G0237000
Oryza glaberrima
ORGLA05G0237000
N
0.000
OS03G0733400
Oryza sativa
OS03G0733400
N
0.000
OS05G0583200
Oryza sativa
OS05G0583200
N
0.000
Pavir.Ea02468
Panicum virgatum
Pavir.Ea02468
N
0.000
Pavir.Eb00995
Panicum virgatum
Pavir.Eb00995
N
0.000
Pavir.Eb00997
Panicum virgatum
Pavir.Eb00997
N
0.000
Pavir.Ia00683
Panicum virgatum
Pavir.Ia00683
N
0.000
Pavir.J05554
Panicum virgatum
Pavir.J05554
N
0.000
Pavir.J31170
Panicum virgatum
Pavir.J31170
N
0.000
PGSC0003DMG400002911
Solanum tuberosum
PGSC0003DMG400002911
N
0.000
PGSC0003DMG400023690
Solanum tuberosum
PGSC0003DMG400023690
N
0.000
PK27100.1
Cannabis sativa
PK27100.1
N
0.000
PRUPE_ppa001983mg
Prunus persica
PRUPE_ppa001983mg
N
0.000
SapurV1A.0197s0170
Salix purpurea
SapurV1A.0197s0170
N
0.000
Sb01g009090
Sorghum bicolor
Sb01g009090
N
0.000
Sb02g043380
Sorghum bicolor
Sb02g043380
N
0.000
Sb08g005330
Sorghum bicolor
Sb08g005330
N
0.000
Si000431m.g
Setaria italica
Si000431m.g
N
0.000
Si034159m.g
Setaria italica
Si034159m.g
N
0.000
Solyc10g080090.1
Solanum lycopersicum
Solyc10g080090.1
N
0.000
Solyc12g009640.1
Solanum lycopersicum
Solyc12g009640.1
N
0.000
TCM_038144
Theobroma cacao
TCM_038144
N
0.000
Traes_4AL_54F25AA7C
Triticum aestivum
Traes_4AL_54F25AA7C
N
0.000
Traes_4AL_A494372EB
Triticum aestivum
Traes_4AL_A494372EB
N
0.000
Traes_4BS_5B1737D7C
Triticum aestivum
Traes_4BS_5B1737D7C
N
0.000
Traes_4BS_D5227ED8B
Triticum aestivum
Traes_4BS_D5227ED8B
N
0.000
Traes_4DS_990D31BB1
Triticum aestivum
Traes_4DS_990D31BB1
N
0.000
Traes_4DS_9C5CECE46
Triticum aestivum
Traes_4DS_9C5CECE46
N
0.000
VIT_11s0016g05750
Vitis vinifera
VIT_11s0016g05750
N
0.000