ORGLA05G0237000 (Oryza glaberrima)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ORGLA05G0237000 T027151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA05G0237000.1 BED ZF 109 160

Links

Other BED ZF family TFs
Other Oryza glaberrima TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS05G0583200 Oryza sativa OS05G0583200 N 1.000
Si000431m.g Setaria italica Si000431m.g N 0.886
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.886
OB08G27840 Oryza brachyantha OB08G27840 N 0.864
OB08G27850 Oryza brachyantha OB08G27850 N 0.864
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.864
Si034159m.g Setaria italica Si034159m.g N 0.864
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.864
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.864
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.864
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.864
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.841
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.841
Pavir.Ea02468 Panicum virgatum Pavir.Ea02468 N 0.841
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.818
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.818
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.818
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.818
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.818
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.795
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.795
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.795
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.795
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.795
BRADI1G09650 Brachypodium distachyon BRADI1G09650 N 0.750
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.750
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.750
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.738
BGIOSGA009862 Oryza indica BGIOSGA009862 N 0.727
BGIOSGA018468 Oryza indica BGIOSGA018468 N 0.727
BGIOSGA020445 Oryza indica BGIOSGA020445 N 0.727
BRADI1G09660 Brachypodium distachyon BRADI1G09660 N 0.727
OB03G40190 Oryza brachyantha OB03G40190 N 0.727
ORGLA03G0300400 Oryza glaberrima ORGLA03G0300400 N 0.727
ORGLA05G0072400 Oryza glaberrima ORGLA05G0072400 N 0.727
ORGLA05G0236800 Oryza glaberrima ORGLA05G0236800 N 0.727
OS03G0733400 Oryza sativa OS03G0733400 N 0.727
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.727
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.727
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.727
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.727
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.727
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.727
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.727
BRADI3G16050 Brachypodium distachyon BRADI3G16050 N 0.714
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.705
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.705
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.705
MLOC_42818 Hordeum vulgare MLOC_42818 N 0.705
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.705
Traes_6AS_2B943BE9C Triticum aestivum Traes_6AS_2B943BE9C N 0.705
Traes_6DS_FC6D9CA6B Triticum aestivum Traes_6DS_FC6D9CA6B N 0.705
TRIUR3_10927 Triticum urartu TRIUR3_10927 N 0.705
mgf025287m Mimulus guttatus mgf025287m N 0.705
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.705
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.705
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.705
MDP0000394762 Malus domestica MDP0000394762 N 0.705
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.705
Pavir.Ib03527 Panicum virgatum Pavir.Ib03527 N 0.705
PK27100.1 Cannabis sativa PK27100.1 N 0.705