Solyc02g081120.2 (Solanum lycopersicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Solyc02g081120.2 T223553_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT6
M02037_2.00 		Arabidopsis thaliana
NNWGACNNNN
NNNNGTCWNN		 PBM
Weirauch et al.(2014)
pTH7296 		0.817 0.807
KNOX3_HORVU
M10790_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$KNOX3_01 		0.813 0.895
GRMZM2G135447
M02139_2.00 		Zea mays
DTGACRKS
SMYGTCAH		 PBM
Weirauch et al.(2014)
pTH6328 		0.769 0.807
GRMZM2G087741
M02138_2.00 		Zea mays
NNTGACRKCN
NGMYGTCANN		 PBM
Weirauch et al.(2014)
pTH5816 		0.764 0.702
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.709 0.789
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g081120.2.1 Homeodomain 259 318

Links

Other Homeodomain family TFs
Other Solanum lycopersicum TFs

310 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_010_00624 Aquilegia coerulea Aquca_010_00624 N
Bostr.15774s0347 Boechera stricta Bostr.15774s0347 N
Bra029148 Brassica rapa Bra029148 N
cassava8973.m1 Manihot esculenta cassava8973.m1 N
cassava9166.m1 Manihot esculenta cassava9166.m1 N
Ca_09158 Cicer arietinum Ca_09158 N
chr5.CM0852.210.nc Lotus japonicus chr5.CM0852.210.nc N
Cla020960 Citrullus lanatus Cla020960 N
Cucsa.352460 Cucumis sativus Cucsa.352460 N
fgenesh1_pg.C_scaffold_8001227 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001227 N
Gorai.003G099900 Gossypium raimondii Gorai.003G099900 N
Gorai.010G022000 Gossypium raimondii Gorai.010G022000 N
GSMUA_Achr8G18570_001 Musa acuminata GSMUA_Achr8G18570_001 N
Lus10018728.g Linum usitatissimum Lus10018728.g N
Lus10024807.g Linum usitatissimum Lus10024807.g N
PK24307.1 Cannabis sativa PK24307.1 N
POPTR_0014s02520 Populus trichocarpa POPTR_0014s02520 N
SapurV1A.0423s0190 Salix purpurea SapurV1A.0423s0190 N
SapurV1A.2355s0020 Salix purpurea SapurV1A.2355s0020 N
SELMODRAFT_23691 Selaginella moellendorffii SELMODRAFT_23691 N
SELMODRAFT_56696 Selaginella moellendorffii SELMODRAFT_56696 N
TCM_033790 Theobroma cacao TCM_033790 N