Traes_1BL_BCA60D8B6 (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_1BL_BCA60D8B6 T224110_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.819 0.754
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.786 0.737
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.786 0.737
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.786 0.719
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.786 0.719
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.786 0.719
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.764 0.667
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.764 0.667
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.757 0.754
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.757 0.737
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.757 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1BL_BCA60D8B6.2 Homeodomain 136 192

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0000232801 Ascaris lumbricoides ALUE_0000232801 I 0.000
ANCCAN_03696 Ancylostoma caninum ANCCAN_03696 I 0.000
ASIM_0001558001 Anisakis simplex ASIM_0001558001 I 0.000
ASU_04180 Ascaris suum ASU_04180 I 0.000
Bm2663 Brugia malayi Bm2663 I 0.000
BTMF_0001276401 Brugia timori BTMF_0001276401 I 0.000
CBG17980 Caenorhabditis briggsae CBG17980 I 0.000
CBN10543 Caenorhabditis brenneri CBN10543 I 0.000
CJA02391 Caenorhabditis japonica CJA02391 I 0.000
CRE20227 Caenorhabditis remanei CRE20227 I 0.000
EEL_0000223001 Elaeophora elaphi EEL_0000223001 I 0.000
EFV58119 Trichinella spiralis EFV58119 I 0.000
ENSMICG00000016886 Microcebus murinus ENSMICG00000016886 I 0.000
ENSMODG00000025439 Monodelphis domestica ENSMODG00000025439 I 0.000
EVEC_0000579401 Enterobius vermicularis EVEC_0000579401 I 0.000
HCOI01745700 Haemonchus contortus HCOI01745700 I 0.000
HelroG148126 Helobdella robusta HelroG148126 N 0.000
HelroG148587 Helobdella robusta HelroG148587 I 0.000
HelroG148593 Helobdella robusta HelroG148593 I 0.000
HelroG165623 Helobdella robusta HelroG165623 I 0.000
HPBE_0001563701 Heligmosomoides bakeri HPBE_0001563701 I 0.000
HPLM_0000060301 Haemonchus placei HPLM_0000060301 I 0.000
LOAG_15485 Loa loa LOAG_15485 I 0.000
nAv.1.0.1.g01517 Acanthocheilonema viteae nAv.1.0.1.g01517 I 0.000
NBR_0000825001 Nippostrongylus brasiliensis NBR_0000825001 I 0.000
nDi.2.2.2.g06197 Dirofilaria immitis nDi.2.2.2.g06197 I 0.000
NECAME_06333 Necator americanus NECAME_06333 I 0.000
nLs.2.1.2.g09719 Litomosoides sigmodontis nLs.2.1.2.g09719 I 0.000
OESDEN_19696 Oesophagostomum dentatum OESDEN_19696 I 0.000
OFLC_0000632501 Onchocerca flexuosa OFLC_0000632501 I 0.000
Ppa-pal-1 Pristionchus pacificus PPA02358 I 0.000
PTRK_0001336600 Parastrongyloides trichosuri PTRK_0001336600 I 0.000
RSKR_0001046900 Rhabditophanes kr3021 RSKR_0001046900 I 0.000
SMUV_0000190101 Syphacia muris SMUV_0000190101 I 0.000
SMUV_0000918401 Syphacia muris SMUV_0000918401 I 0.000
SPAL_0001492700 Strongyloides papillosus SPAL_0001492700 I 0.000
SSTP_0000576200 Strongyloides stercoralis SSTP_0000576200 I 0.000
SVE_0397300 Strongyloides venezuelensis SVE_0397300 I 0.000
SVUK_0001504901 Strongylus vulgaris SVUK_0001504901 I 0.000
TCNE_0001280701 Toxocara canis TCNE_0001280701 I 0.000
pal-1 Caenorhabditis elegans WBGene00003912 D 0.000
WBGene00246390 Onchocerca volvulus WBGene00246390 I 0.000
WUBG_02562 Wuchereria bancrofti WUBG_02562 I 0.000