Traes_4BL_0F02B2343 (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_4BL_0F02B2343 T224201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.826 0.646
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.638 0.562
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.606 0.417
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.606 0.417
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.606 0.417
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.606 0.417
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4BL_0F02B2343.1 Homeodomain 349 399

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

1006 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA029574 Oryza indica BGIOSGA029574 I 0.000
Bo3g180930 Brassica oleracea Bo3g180930 N 0.000
Bo3g180960 Brassica oleracea Bo3g180960 I 0.000
Bo3g184540 Brassica oleracea Bo3g184540 N 0.000
Bo3g185390 Brassica oleracea Bo3g185390 I 0.000
Bo3g185420 Brassica oleracea Bo3g185420 I 0.000
Bo6g034690 Brassica oleracea Bo6g034690 I 0.000
Bo6g051390 Brassica oleracea Bo6g051390 I 0.000
Bostr.6758s0015 Boechera stricta Bostr.6758s0015 I 0.000
Bra030847 Brassica rapa Bra030847 I 0.000
Bra030848 Brassica rapa Bra030848 N 0.000
Bra037106 Brassica rapa Bra037106 I 0.000
Bra038006 Brassica rapa Bra038006 I 0.000
Ca_13524 Cicer arietinum Ca_13524 I 0.000
evm.TU.supercontig_12.196 Carica papaya evm.TU.supercontig_12.196 I 0.000
GLYMA06G37100 Glycine max GLYMA06G37100 I 0.000
GLYMA17G24700 Glycine max GLYMA17G24700 I 0.000
GRMZM2G052671 Zea mays GRMZM2G052671 I 0.000
GRMZM2G151407 Zea mays GRMZM2G151407 I 0.000
GRMZM2G449681 Zea mays GRMZM2G449681 I 0.000
Lus10026409.g Linum usitatissimum Lus10026409.g I 0.000
MLOC_58019 Hordeum vulgare MLOC_58019 I 0.000
MLOC_67851 Hordeum vulgare MLOC_67851 I 0.000
OB04G23060 Oryza brachyantha OB04G23060 I 0.000
OBART09G14210 Oryza barthii OBART09G14210 I 0.000
OGLUM09G14860 Oryza glumaepatula OGLUM09G14860 I 0.000
OLONG_005396 Oryza longistaminata OLONG_005396 I 0.000
OMERI09G11000 Oryza meridionalis OMERI09G11000 I 0.000
ONIVA04G13890 Oryza nivara ONIVA04G13890 I 0.000
ONIVA09G14780 Oryza nivara ONIVA09G14780 I 0.000
OPUNC09G12700 Oryza punctata OPUNC09G12700 I 0.000
orange1.1g011483m.g Citrus sinensis orange1.1g011483m.g I 0.000
ORGLA09G0109100 Oryza glaberrima ORGLA09G0109100 I 0.000
ORUFI09G15250 Oryza rufipogon ORUFI09G15250 I 0.000
OS09G0481700 Oryza sativa OS09G0481700 I 0.000
Pavir.Bb02418 Panicum virgatum Pavir.Bb02418 I 0.000
Pavir.J13787 Panicum virgatum Pavir.J13787 I 0.000
Pavir.J40119 Panicum virgatum Pavir.J40119 I 0.000
Sb02g027950 Sorghum bicolor Sb02g027950 I 0.000
Si029342m.g Setaria italica Si029342m.g I 0.000
Thhalv10012199m.g Eutrema salsugineum Thhalv10012199m.g I 0.000