CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra030848
(
Brassica rapa
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Bra030848
T352341_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra030848.1-P
WRKY
108
165
DDGYSWKKYGQRLIMGNQNTRSYYKCTFAGCDVKKHVERRADNVKLLVITYYGNHEHD
Links
Other
WRKY
family TFs
Other
Brassica rapa
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g185400
Brassica oleracea
Bo3g185400
N
0.884
Bo3g184540
Brassica oleracea
Bo3g184540
N
0.861
Bo3g185390
Brassica oleracea
Bo3g185390
I
0.858
Lus10026409.g
Linum usitatissimum
Lus10026409.g
I
0.822
GLYMA17G24700
Glycine max
GLYMA17G24700
I
0.821
Ca_13524
Cicer arietinum
Ca_13524
I
0.821
Pavir.J13787
Panicum virgatum
Pavir.J13787
I
0.820
Bo6g034690
Brassica oleracea
Bo6g034690
I
0.818
orange1.1g011483m.g
Citrus sinensis
orange1.1g011483m.g
I
0.817
GLYMA06G37100
Glycine max
GLYMA06G37100
I
0.816
MLOC_67851
Hordeum vulgare
MLOC_67851
I
0.816
evm.TU.supercontig_12.196
Carica papaya
evm.TU.supercontig_12.196
I
0.816
BGIOSGA029574
Oryza indica
BGIOSGA029574
I
0.815
Bo6g051390
Brassica oleracea
Bo6g051390
I
0.815
Bra037106
Brassica rapa
Bra037106
I
0.815
GRMZM2G151407
Zea mays
GRMZM2G151407
I
0.815
MLOC_58019
Hordeum vulgare
MLOC_58019
I
0.815
OB04G23060
Oryza brachyantha
OB04G23060
I
0.815
OBART09G14210
Oryza barthii
OBART09G14210
I
0.815
OGLUM09G14860
Oryza glumaepatula
OGLUM09G14860
I
0.815
OLONG_005396
Oryza longistaminata
OLONG_005396
I
0.815
OMERI09G11000
Oryza meridionalis
OMERI09G11000
I
0.815
ONIVA04G13890
Oryza nivara
ONIVA04G13890
I
0.815
ONIVA09G14780
Oryza nivara
ONIVA09G14780
I
0.815
OPUNC09G12700
Oryza punctata
OPUNC09G12700
I
0.815
ORGLA09G0109100
Oryza glaberrima
ORGLA09G0109100
I
0.815
ORUFI09G15250
Oryza rufipogon
ORUFI09G15250
I
0.815
OS09G0481700
Oryza sativa
OS09G0481700
I
0.815
Sb02g027950
Sorghum bicolor
Sb02g027950
I
0.815
Si029342m.g
Setaria italica
Si029342m.g
I
0.815
Pavir.Bb02418
Panicum virgatum
Pavir.Bb02418
I
0.815
Pavir.J40119
Panicum virgatum
Pavir.J40119
I
0.815
Bo3g180930
Brassica oleracea
Bo3g180930
N
0.814
Bo3g180960
Brassica oleracea
Bo3g180960
I
0.814
Bra038006
Brassica rapa
Bra038006
I
0.814
GRMZM2G052671
Zea mays
GRMZM2G052671
I
0.813
Thhalv10012199m.g
Eutrema salsugineum
Thhalv10012199m.g
I
0.813
GRMZM2G449681
Zea mays
GRMZM2G449681
I
0.812
Bo3g185420
Brassica oleracea
Bo3g185420
I
0.811
Bra030847
Brassica rapa
Bra030847
I
0.811
Bostr.6758s0015
Boechera stricta
Bostr.6758s0015
I
0.811