CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo3g180930
(
Brassica oleracea
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Bo3g180930
T352129_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g180930.1
WRKY
273
330
DDGFRWRKYGQKVVTGNANPRSYYRCTYTGCEVKKLAEKNVDNVKLVVATYDGIHEHV
Links
Other
WRKY
family TFs
Other
Brassica oleracea
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g180960
Brassica oleracea
Bo3g180960
I
0.872
Bo6g051390
Brassica oleracea
Bo6g051390
I
0.846
Bra037106
Brassica rapa
Bra037106
I
0.846
Bostr.6758s0015
Boechera stricta
Bostr.6758s0015
I
0.843
Thhalv10012199m.g
Eutrema salsugineum
Thhalv10012199m.g
I
0.842
WRKY10
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1004208
I
0.836
Cagra.0001s0017
Capsella grandiflora
Cagra.0001s0017
I
0.835
Carubv10011619m.g
Capsella rubella
Carubv10011619m.g
N
0.835
WRKY10
Arabidopsis thaliana
AT1G55600
I
0.834
Bo3g185420
Brassica oleracea
Bo3g185420
I
0.830
Bra030847
Brassica rapa
Bra030847
I
0.830
Pavir.J13787
Panicum virgatum
Pavir.J13787
I
0.830
Lus10026409.g
Linum usitatissimum
Lus10026409.g
I
0.826
BGIOSGA029574
Oryza indica
BGIOSGA029574
I
0.824
GRMZM2G151407
Zea mays
GRMZM2G151407
I
0.824
MLOC_58019
Hordeum vulgare
MLOC_58019
I
0.824
OB04G23060
Oryza brachyantha
OB04G23060
I
0.824
OBART09G14210
Oryza barthii
OBART09G14210
I
0.824
OGLUM09G14860
Oryza glumaepatula
OGLUM09G14860
I
0.824
OLONG_005396
Oryza longistaminata
OLONG_005396
I
0.824
OMERI09G11000
Oryza meridionalis
OMERI09G11000
I
0.824
ONIVA04G13890
Oryza nivara
ONIVA04G13890
I
0.824
ONIVA09G14780
Oryza nivara
ONIVA09G14780
I
0.824
OPUNC09G12700
Oryza punctata
OPUNC09G12700
I
0.824
ORGLA09G0109100
Oryza glaberrima
ORGLA09G0109100
I
0.824
ORUFI09G15250
Oryza rufipogon
ORUFI09G15250
I
0.824
OS09G0481700
Oryza sativa
OS09G0481700
I
0.824
Sb02g027950
Sorghum bicolor
Sb02g027950
I
0.824
Si029342m.g
Setaria italica
Si029342m.g
I
0.824
Pavir.Bb02418
Panicum virgatum
Pavir.Bb02418
I
0.824
Pavir.J40119
Panicum virgatum
Pavir.J40119
I
0.824
orange1.1g011483m.g
Citrus sinensis
orange1.1g011483m.g
I
0.821
GRMZM2G052671
Zea mays
GRMZM2G052671
I
0.820
Ca_13524
Cicer arietinum
Ca_13524
I
0.820
Bo6g034690
Brassica oleracea
Bo6g034690
I
0.819
GRMZM2G449681
Zea mays
GRMZM2G449681
I
0.818
evm.TU.supercontig_12.196
Carica papaya
evm.TU.supercontig_12.196
I
0.818
Bo3g184540
Brassica oleracea
Bo3g184540
N
0.817
MLOC_67851
Hordeum vulgare
MLOC_67851
I
0.817
Bra038006
Brassica rapa
Bra038006
I
0.816
GLYMA06G37100
Glycine max
GLYMA06G37100
I
0.816
Ciclev10032943m.g
Citrus clementina
Ciclev10032943m.g
I
0.816
orange1.1g031298m.g
Citrus sinensis
orange1.1g031298m.g
I
0.816
Bo3g185400
Brassica oleracea
Bo3g185400
N
0.814
Bra030848
Brassica rapa
Bra030848
N
0.814
PDK_20s1309411g001
Phoenix dactylifera
PDK_20s1309411g001
I
0.814
Bo3g185390
Brassica oleracea
Bo3g185390
I
0.813
evm.TU.supercontig_807.4
Carica papaya
evm.TU.supercontig_807.4
I
0.813
chr4.CM0333.60.nd
Lotus japonicus
chr4.CM0333.60.nd
I
0.812
GLYMA17G24700
Glycine max
GLYMA17G24700
I
0.811
Solyc04g051690.2
Solanum lycopersicum
Solyc04g051690.2
I
0.810
cassava37218.valid.m1
Manihot esculenta
cassava37218.valid.m1
I
0.810
OMERI04G23060
Oryza meridionalis
OMERI04G23060
I
0.809
SELMODRAFT_18126
Selaginella moellendorffii
SELMODRAFT_18126
I
0.809
SELMODRAFT_69405
Selaginella moellendorffii
SELMODRAFT_69405
I
0.809
Si031470m.g
Setaria italica
Si031470m.g
I
0.809
MDP0000263768
Malus domestica
MDP0000263768
I
0.809
MDP0000836661
Malus domestica
MDP0000836661
I
0.809
SapurV1A.1151s0090
Salix purpurea
SapurV1A.1151s0090
I
0.809
PGSC0003DMG400011633
Solanum tuberosum
PGSC0003DMG400011633
I
0.808
TRAES3BF267200010CFD_g
Triticum aestivum
TRAES3BF267200010CFD_g
I
0.808
VIT_04s0008g01470
Vitis vinifera
VIT_04s0008g01470
I
0.808
chr2.CM0641.70.nc
Lotus japonicus
chr2.CM0641.70.nc
I
0.808