KNAT7 (Vitis vinifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VIT_02s0025g04630 T224518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.731 0.673
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.715 0.846
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.715 0.846
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.710 0.885
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.705 0.923
GRMZM2G087741
M02138_2.00 		Zea mays
NNTGACRKCN
NGMYGTCANN		 PBM
Weirauch et al.(2014)
pTH5816 		0.634 0.673
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_02s0025g04630.t01 Homeodomain 221 275

Links

Other Homeodomain family TFs
Other Vitis vinifera TFs

315 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30024.m001687 Ricinus communis 30024.m001687 N 0.000
RKD4 Arabidopsis thaliana AT5G53040 N 0.000
Bo2g046220 Brassica oleracea Bo2g046220 N 0.000
Bo9g108730 Brassica oleracea Bo9g108730 N 0.000
Bostr.26833s0978 Boechera stricta Bostr.26833s0978 N 0.000
Bra003088 Brassica rapa Bra003088 N 0.000
Bra022622 Brassica rapa Bra022622 N 0.000
Cagra.0084s0050 Capsella grandiflora Cagra.0084s0050 N 0.000
Carubv10028317m.g Capsella rubella Carubv10028317m.g N 0.000
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.000
cassava39076.m1 Manihot esculenta cassava39076.m1 N 0.000
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N 0.000
Cla004331 Citrullus lanatus Cla004331 N 0.000
Cucsa.032230 Cucumis sativus Cucsa.032230 N 0.000
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.000
fgenesh1_pm.C_scaffold_8001005 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001005 N 0.000
gene12898-v1.0-hybrid Fragaria vesca gene12898-v1.0-hybrid N 0.000
GLYMA06G13530 Glycine max GLYMA06G13530 N 0.000
GLYMA06G13540 Glycine max GLYMA06G13540 N 0.000
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.000
Gorai.006G266900 Gossypium raimondii Gorai.006G266900 I 0.000
GSMUA_Achr4G08610_001 Musa acuminata GSMUA_Achr4G08610_001 N 0.000
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.000
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.000
MDP0000141137 Malus domestica MDP0000141137 N 0.000
MDP0000819497 Malus domestica MDP0000819497 N 0.000
mgf025545m Mimulus guttatus mgf025545m N 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
orange1.1g036926m.g Citrus sinensis orange1.1g036926m.g I 0.000
PDK_20s1788591g001 Phoenix dactylifera PDK_20s1788591g001 N 0.000
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.000
Pm019768 Prunus mume Pm019768 N 0.000
Pm024905 Prunus mume Pm024905 I 0.000
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N 0.000
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.000
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.000
PRUPE_ppa023107mg Prunus persica PRUPE_ppa023107mg I 0.000
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N 0.000
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N 0.000
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N 0.000
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N 0.000
TCM_015430 Theobroma cacao TCM_015430 N 0.000
Thhalv10015321m.g Eutrema salsugineum Thhalv10015321m.g N 0.000
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.000
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.000