POPTR_0012s02390 (Populus trichocarpa)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 POPTR_0012s02390 T320750_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s02390.1 RWP-RK 140 188

Links

Other RWP-RK family TFs
Other Populus trichocarpa TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.918
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N 0.918
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N 0.918
30024.m001687 Ricinus communis 30024.m001687 N 0.816
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.816
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.816
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.796
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.796
MDP0000141137 Malus domestica MDP0000141137 N 0.796
TCM_015430 Theobroma cacao TCM_015430 N 0.776
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.776
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.755
Pm019768 Prunus mume Pm019768 N 0.755
cassava39076.m1 Manihot esculenta cassava39076.m1 N 0.755
mgf025545m Mimulus guttatus mgf025545m N 0.755
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.755
MDP0000819497 Malus domestica MDP0000819497 N 0.755
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.735
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.735
gene12898-v1.0-hybrid Fragaria vesca gene12898-v1.0-hybrid N 0.735
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.730
LPERR01G16660 Leersia perrieri LPERR01G16660 N 0.714
OGLUM01G22860 Oryza glumaepatula OGLUM01G22860 N 0.714
Si005102m.g Setaria italica Si005102m.g N 0.714
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.714
Cla004331 Citrullus lanatus Cla004331 N 0.714
Pavir.Aa00708 Panicum virgatum Pavir.Aa00708 I 0.714
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I 0.714
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N 0.714