fgenesh1_pm.C_scaffold_8001005 (Arabidopsis lyrata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 fgenesh1_pm.C_scaffold_8001005 T320038_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_8001005 RWP-RK 145 193

Links

Other RWP-RK family TFs
Other Arabidopsis lyrata TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RKD4 Arabidopsis thaliana AT5G53040 N 0.980
Bostr.26833s0978 Boechera stricta Bostr.26833s0978 N 0.959
Cagra.0084s0050 Capsella grandiflora Cagra.0084s0050 N 0.959
Carubv10028317m.g Capsella rubella Carubv10028317m.g N 0.959
Bo2g046220 Brassica oleracea Bo2g046220 N 0.898
Bra022622 Brassica rapa Bra022622 N 0.898
Thhalv10015321m.g Eutrema salsugineum Thhalv10015321m.g N 0.898
Bra003088 Brassica rapa Bra003088 N 0.878
Bo9g108730 Brassica oleracea Bo9g108730 N 0.857
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.811
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.776
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.757
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.735
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.735
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.735
TCM_015430 Theobroma cacao TCM_015430 N 0.735
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.735
mgf025545m Mimulus guttatus mgf025545m N 0.735
orange1.1g036926m.g Citrus sinensis orange1.1g036926m.g I 0.733
Si020172m.g Setaria italica Si020172m.g I 0.730
GLYMA06G13540 Glycine max GLYMA06G13540 N 0.714
GSMUA_Achr4G08610_001 Musa acuminata GSMUA_Achr4G08610_001 N 0.714
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.714
TCM_014009 Theobroma cacao TCM_014009 I 0.714
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.714
Pm019768 Prunus mume Pm019768 N 0.714
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.714
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.714
Gorai.008G193400 Gossypium raimondii Gorai.008G193400 I 0.714
MDP0000141137 Malus domestica MDP0000141137 N 0.714
MDP0000261199 Malus domestica MDP0000261199 I 0.714
MDP0000819497 Malus domestica MDP0000819497 N 0.714
PDK_20s1788591g001 Phoenix dactylifera PDK_20s1788591g001 N 0.714
LjSGA_030914.1 Lotus japonicus LjSGA_030914.1 N 0.700