Afo_R003397 (Aptenodytes forsteri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Afo_R003397 T225056_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hoxc8
M00391_2.00 		Mus musculus
NNDNYNNNN
NNNNRNHNN		 PBM
Berger et al.(2008)
Hoxc8_3429 		0.859 0.982
HOXC8
M04912_2.00 		Homo sapiens
NYAATTRN
NYAATTRN		 SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX 		0.859 0.982
HOXC8
M10636_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXC8_Q3 		0.859 0.982
HOXC8
M04913_2.00 		Homo sapiens
NYMATKRN
NYMATKRN		 SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1 		0.859 0.982
HOXC8
M04914_2.00 		Homo sapiens
NTWAYGRY
RYCRTWAN		 SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2 		0.859 0.982
Hoxb8
M00517_2.00 		Mus musculus
NWWAYNDNN
NNHNRTWWN		 PBM
Berger et al.(2008)
Hoxb8_3780 		0.826 0.965
HOXB8
M05048_2.00 		Homo sapiens
NTAATKRM
KYMATTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX 		0.826 0.965
HOXB8
M09141_2.00 		Homo sapiens
BMATHAATCAA
TTGATTDATKV		 Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C 		0.826 0.965
Hoxb8
M09214_2.00 		Mus musculus
BMATHAATCAA
TTGATTDATKV		 Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C 		0.826 0.965
HOXB8
M05049_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1 		0.826 0.965
HOXB8
M05050_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2 		0.826 0.965
HOXD8
M03221_2.00 		Homo sapiens
VHWAATKWDN
NHWMATTWDB		 SELEX
Jolma et al.(2013)
HOXD8_1 		0.824 0.930
HOXD8
M05310_2.00 		Homo sapiens
BTAATKRY
RYMATTAV		 SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX 		0.824 0.930
HOXD8
M05311_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1 		0.824 0.930
HOXD8
M05312_2.00 		Homo sapiens
NTWAYGRY
RYCRTWAN		 SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2 		0.824 0.930
Hoxd8
M00436_2.00 		Mus musculus
NNWWYNNN
NNNRWWNN		 PBM
Berger et al.(2008)
Hoxd8_2644 		0.812 0.912
Hoxa6
M00494_2.00 		Mus musculus
NWWATKRNN
NNYMATWWN		 PBM
Berger et al.(2008)
Hoxa6_1040 		0.812 0.807
HOXA6
M04974_2.00 		Homo sapiens
NNTAATKRVN
NBYMATTANN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX 		0.812 0.807
HOXA6
M04975_2.00 		Homo sapiens
NNTAATKRBN
NVYMATTANN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1 		0.812 0.807
HOXA6
M04976_2.00 		Homo sapiens
NTAAYGRY
RYCRTTAN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2 		0.812 0.807
Hoxb6
M00381_2.00 		Mus musculus
NNDHNNN
NNNDHNN		 PBM
Berger et al.(2008)
Hoxb6_3428 		0.808 0.807
HOXB6
M04999_2.00 		Homo sapiens
NTAATKRY
RYMATTAN		 SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX 		0.808 0.807
HOXB6
M05000_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1 		0.808 0.807
HOXB6
M05001_2.00 		Homo sapiens
NTWATKRB
VYMATWAN		 SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2 		0.808 0.807
Hoxc6
M00392_2.00 		Mus musculus
TTAATTAB
VTAATTAA		 PBM
Berger et al.(2008)
Hoxc6_3954 		0.799 0.807
abd-A
M03770_2.00 		Drosophila melanogaster
NNTAATKRCN
NGYMATTANN		 SELEX
Nitta et al.(2015)
abd-A_1 		0.796 0.789
abd-A
M03771_2.00 		Drosophila melanogaster
NNTAATKRCN
NGYMATTANN		 SELEX
Nitta et al.(2015)
abd-A_2 		0.796 0.789
abd-A
M06475_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0206.1 		0.796 0.789
abd-A
M06210_2.00 		Drosophila melanogaster
WTWATKDM
KHMATWAW		 B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014 		0.796 0.789
abd-A
M09671_2.00 		Drosophila melanogaster
HTAATKRH
DYMATTAD		 Misc
Kulakovskiy et al.(2009)
abd-A 		0.796 0.789
abd-A
M10778_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ABDA_Q6 		0.796 0.789
Ubx
M00558_2.00 		Drosophila melanogaster
NWWAYDDNN
NNHHRTWWN		 PBM
Busser et al.(2012a)
Ubx 		0.792 0.789
Ubx
M03804_2.00 		Drosophila melanogaster
NTAATKRH
DYMATTAN		 SELEX
Nitta et al.(2015)
Ubx_1 		0.792 0.789
Ubx
M06499_2.00 		Drosophila melanogaster
NTTAATKR
YMATTAAN		 B1H
Mathelier et al.(2014)
MA0094.2 		0.792 0.789
Ubx
M06273_2.00 		Drosophila melanogaster
NTTAATKR
YMATTAAN		 B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944 		0.792 0.789
Ubx
M06274_2.00 		Drosophila melanogaster
TAATKD
HMATTA		 B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944 		0.792 0.789
Ubx
M06275_2.00 		Drosophila melanogaster
NTTWATKR
YMATWAAN		 B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944 		0.792 0.789
Ubx
M09680_2.00 		Drosophila melanogaster
TTAATKR
YMATTAA		 Misc
Kulakovskiy et al.(2009)
Ubx 		0.792 0.789
Ubx
M10788_2.00 		Drosophila melanogaster
NNVNNNNTAATKRNBHNND
HNNDVNYMATTANNNNBNN		 Transfac
Matys et al.(2006)
I$UBX_01 		0.792 0.789
Hoxa7
M00476_2.00 		Mus musculus
NNWAYNDNN
NNHNRTWNN		 PBM
Berger et al.(2008)
Hoxa7_2668 		0.781 0.807
Hoxa7
M00477_2.00 		Mus musculus
NYHHYNNNN
NNNNRDDRN		 PBM
Berger et al.(2008)
Hoxa7_3750 		0.781 0.807
HOXA7
M05069_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX 		0.781 0.807
Antp
M06549_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0166.1 		0.781 0.807
Antp
M06374_2.00 		Drosophila melanogaster
YTTAATKA
TMATTAAR		 B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095 		0.781 0.807
Antp
M06375_2.00 		Drosophila melanogaster
WTAATW
AATTAW		 B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095 		0.781 0.807
Antp
M06376_2.00 		Drosophila melanogaster
NHTAATKR
YMATTADN		 B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095 		0.781 0.807
Antp
M09682_2.00 		Drosophila melanogaster
TYTTWATKA
TMATWAARA		 Misc
Kulakovskiy et al.(2009)
Antp 		0.781 0.807
Antp
M10789_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ANTP_Q6_01 		0.781 0.807
HOXA7
M10679_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA7_01 		0.781 0.807
HOXA7
M05070_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1 		0.781 0.807
HOXA7
M05071_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2 		0.781 0.807
HOXB7
M00334_2.00 		Homo sapiens
NBRDNNN
NNNHYVN		 PBM
Barrera et al.(2016)
HOXB7_REF 		0.764 0.772
Hoxb7
M00481_2.00 		Mus musculus
NNWAYNDN
NHNRTWNN		 PBM
Berger et al.(2008)
Hoxb7_3953 		0.764 0.772
HOXB7
M05404_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX 		0.764 0.772
HOXB7
M05407_2.00 		Homo sapiens
BBTAATTRCN
NGYAATTAVV		 SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX 		0.764 0.772
HOXB7
M09166_2.00 		Homo sapiens
MATHAATCAW
WTGATTDATK		 Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C 		0.764 0.772
Hoxb7
M09206_2.00 		Mus musculus
MATHAATCAW
WTGATTDATK		 Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C 		0.764 0.772
HOXB7
M05405_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1 		0.764 0.772
HOXB7
M05406_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2 		0.764 0.772
HOXB7
M05408_2.00 		Homo sapiens
NNTAATKRCN
NGYMATTANN		 SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1 		0.764 0.772
HOXB7
M05409_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2 		0.764 0.772
HOXB7
M00333_2.00 		Homo sapiens
NHATWTATTN
NAATAWATDN		 PBM
Barrera et al.(2016)
HOXB7_R189C 		0.764 0.754
ftz
M03795_2.00 		Drosophila melanogaster
WTAATTRC
GYAATTAW		 SELEX
Nitta et al.(2015)
ftz_1 		0.756 0.702
ftz
M06488_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0225.1 		0.756 0.702
ftz
M06247_2.00 		Drosophila melanogaster
VTTAATKA
TMATTAAB		 B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077 		0.756 0.702
ftz
M06248_2.00 		Drosophila melanogaster
TAATKRNH
DNYMATTA		 B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077 		0.756 0.702
ftz
M06249_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077 		0.756 0.702
ftz
M09679_2.00 		Drosophila melanogaster
YTAATKRNN
NNYMATTAR		 Misc
Kulakovskiy et al.(2009)
ftz 		0.756 0.702
ftz
M10787_2.00 		Drosophila melanogaster
CTTAATTRBHBB
VVDVYAATTAAG		 Transfac
Matys et al.(2006)
I$FTZ_01 		0.756 0.702
Q8I9J5_9BILA
M02214_2.00 		Spadella cephaloptera
NVTAWTWABN
NVTWAWTABN		 PBM
Weirauch et al.(2014)
pTH6164 		0.750 0.667
CBG00029
M01240_2.00 		Caenorhabditis briggsae
ATTAATTA
TAATTAAT		 PBM
Lambert et al.(2019)
pTH11471 		0.742 0.737
egl-5
M09581_2.00 		Caenorhabditis elegans
DWTTWATGGS
SCCATWAAWH		 Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode 		0.710 0.544
CBG00023
M02062_2.00 		Caenorhabditis briggsae
NWWATKDNNN
NNNHMATWWN		 PBM
Weirauch et al.(2014)
pTH5778 		0.710 0.526
HOXB7
M00331_2.00 		Homo sapiens
NNNNNNY
RNNNNNN		 PBM
Barrera et al.(2016)
HOXB7_K191R 		0.708 0.754
HOXB7
M00332_2.00 		Homo sapiens
NDWATATAYN
NRTATATWHN		 PBM
Barrera et al.(2016)
HOXB7_M190L 		0.688 0.754
CBG23031
M01245_2.00 		Caenorhabditis briggsae
NTTWATKRNN
NNYMATWAAN		 PBM
Lambert et al.(2019)
pTH11458 		0.656 0.579
Hoxc9
M00470_2.00 		Mus musculus
NGTAATWAAN
NTTWATTACN		 PBM
Berger et al.(2008)
Hoxc9_2367 		0.626 0.737
Hoxd9
M03282_2.00 		Mus musculus
TTTWATKKB
VMMATWAAA		 SELEX
Jolma et al.(2013)
Hoxd9_1 		0.626 0.737
Hoxd9
M03283_2.00 		Mus musculus
DWTTWATKRY
RYMATWAAWH		 SELEX
Jolma et al.(2013)
Hoxd9_2 		0.626 0.737
Hoxd9
M03284_2.00 		Mus musculus
DTTWAYGRB
VYCRTWAAH		 SELEX
Jolma et al.(2013)
Hoxd9_3 		0.626 0.737
HOXC9
M05331_2.00 		Homo sapiens
GTCGTAAAAN
NTTTTACGAC		 SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1 		0.626 0.737
HOXC9
M05332_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2 		0.626 0.737
HOXD9
M05104_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1 		0.626 0.737
HOXD9
M05105_2.00 		Homo sapiens
RTCRTAAAWN
NWTTTAYGAY		 SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2 		0.626 0.737
HOXD9
M05108_2.00 		Homo sapiens
RTCGTAAAWN
NWTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1 		0.626 0.737
HOXD9
M05109_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2 		0.626 0.737
Hoxc9
M08137_2.00 		Mus musculus
NWGATTTATDGSH
DSCHATAAATCWN		 ChIP-seq
Mathelier et al.(2014)
MA0485.1 		0.626 0.737
HOXC9
M09161_2.00 		Homo sapiens
HTTWATKGCH
DGCMATWAAD		 Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C 		0.626 0.737
Hoxc9
M09574_2.00 		Mus musculus
TGATTTATDGCH
DGCHATAAATCA		 Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812 		0.626 0.737
HOXD9
M10686_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD9_Q2 		0.626 0.737
HOXC9
M05333_2.00 		Homo sapiens
RTCGTAAAHN
NDTTTACGAY		 SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1 		0.626 0.737
HOXC9
M05334_2.00 		Homo sapiens
NTTTWATKRC
GYMATWAAAN		 SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2 		0.626 0.737
HOXD9
M05106_2.00 		Homo sapiens
NNTTWATKRC
GYMATWAANN		 SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1 		0.626 0.737
HOXD9
M05107_2.00 		Homo sapiens
RTCGTAAANN
NNTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2 		0.626 0.737
HOXD9
M05110_2.00 		Homo sapiens
RTCGTAAANN
NNTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1 		0.626 0.737
HOXD9
M05111_2.00 		Homo sapiens
NDTTWATKRC
GYMATWAAHN		 SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2 		0.626 0.737
Hoxb9
M00410_2.00 		Mus musculus
NTTWAYDDNN
NNHHRTWAAN		 PBM
Berger et al.(2008)
Hoxb9_3413 		0.626 0.719
Hoxa9
M00475_2.00 		Mus musculus
NNDDBNNN
NNNVHHNN		 PBM
Berger et al.(2008)
Hoxa9_2622 		0.626 0.719
HOXA9
M03085_2.00 		Homo sapiens
NNDTTWAYGAYN
NRTCRTWAAHNN		 SELEX
Jolma et al.(2013)
HOXA10_1 		0.626 0.719
HOXA9
M03086_2.00 		Homo sapiens
NDTTWATKRYN
NRYMATWAAHN		 SELEX
Jolma et al.(2013)
HOXA10_2 		0.626 0.719
HOXA9
M04932_2.00 		Homo sapiens
NNDWWABKRC
GYMVTWWHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1 		0.626 0.719
HOXA9
M04933_2.00 		Homo sapiens
NNDTWAYGRB
VYCRTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2 		0.626 0.719
HOXB9
M05289_2.00 		Homo sapiens
RTCRTAAAWN
NWTTTAYGAY		 SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1 		0.626 0.719
HOXB9
M05290_2.00 		Homo sapiens
NTTTWATKRC
GYMATWAAAN		 SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2 		0.626 0.719
Hoxa9
M08138_2.00 		Mus musculus
TGATTKATKRB
VYMATMAATCA		 ChIP-seq
Mathelier et al.(2014)
MA0594.1 		0.626 0.719
HOXA9
M09130_2.00 		Homo sapiens
DCATAAAYYRBH
DVYRRTTTATGH		 Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C 		0.626 0.719
HOXA9
M09131_2.00 		Homo sapiens
HHATAAATCAH
DTGATTTATDD		 Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B 		0.626 0.719
Hoxa9
M09203_2.00 		Mus musculus
HHATAAATCAH
DTGATTTATDD		 Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B 		0.626 0.719
Hoxa9
M09575_2.00 		Mus musculus
WGATTKATDRBY
RVYHATMAATCW		 Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509 		0.626 0.719
HOXA9
M10642_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA10_Q6 		0.626 0.719
HOXA9
M10643_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_04 		0.626 0.719
HOXA9
M10644_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_Q5_01 		0.626 0.719
HOXA9
M10645_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_Q5 		0.626 0.719
HOXB9
M05291_2.00 		Homo sapiens
GTCGTAAAHB
VDTTTACGAC		 SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX 		0.626 0.719
HOXA9
M04934_2.00 		Homo sapiens
NNDTWAYKRC
GYMRTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1 		0.626 0.719
HOXA9
M04935_2.00 		Homo sapiens
NNDTWACGAY
RTCGTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2 		0.626 0.719
CG34031
M02126_2.00 		Drosophila melanogaster
NNNDNNRN
NYNNHNNN		 PBM
Weirauch et al.(2014)
pTH6447 		0.623 0.544
CG34031
M06548_2.00 		Drosophila melanogaster
TTAATWG
CWATTAA		 B1H
Mathelier et al.(2014)
MA0444.1 		0.623 0.544
CG34031
M06372_2.00 		Drosophila melanogaster
BTTAATWG
CWATTAAV		 B1H
Zhu et al.(2011)
CG34031_Cell_FBgn0054031 		0.623 0.544
CG34031
M06373_2.00 		Drosophila melanogaster
NTTAATDR
YHATTAAN		 B1H
Zhu et al.(2011)
CG34031_SOLEXA_FBgn0054031 		0.623 0.544
ceh-19
M02180_2.00 		Caenorhabditis elegans
NTWAWDRNN
NNYHWTWAN		 PBM
Weirauch et al.(2014)
pTH5661 		0.623 0.526
Scr
M03799_2.00 		Drosophila melanogaster
BTAATKRB
VYMATTAV		 SELEX
Nitta et al.(2015)
Scr_1 		0.621 0.754
Scr
M06496_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0203.1 		0.621 0.754
Scr
M06266_2.00 		Drosophila melanogaster
HVYTAATKA
TMATTARBD		 B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339 		0.621 0.754
Scr
M06267_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339 		0.621 0.754
Hoxa5
M00478_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxa5_3415 		0.621 0.737
Hoxb5
M00480_2.00 		Mus musculus
NWDWTNNNN
NNNNAWHWN		 PBM
Berger et al.(2008)
Hoxb5_3122 		0.621 0.737
HOXB5
M03125_2.00 		Homo sapiens
NNKAATKRNN
NNYMATTMNN		 SELEX
Jolma et al.(2013)
HOXB5_1 		0.621 0.737
HOXA5
M04968_2.00 		Homo sapiens
STAATKRS
SYMATTAS		 SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX 		0.621 0.737
HOXA5
M04971_2.00 		Homo sapiens
NTMATKRB
VYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX 		0.621 0.737
HOXB5
M05051_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX 		0.621 0.737
HOXB5
M05054_2.00 		Homo sapiens
STMATKAB
VTMATKAS		 SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX 		0.621 0.737
HOXA5
M10652_2.00 		Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN		 Transfac
Matys et al.(2006)
V$HOX13_01 		0.621 0.737
HOXA5
M08457_2.00 		Homo sapiens
CDBWAATK
MATTWVHG		 COMPILED
Mathelier et al.(2014)
MA0158.1 		0.621 0.737
HOXA5
M04969_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1 		0.621 0.737
HOXA5
M04970_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2 		0.621 0.737
HOXA5
M04972_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1 		0.621 0.737
HOXA5
M04973_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2 		0.621 0.737
HOXB5
M05052_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1 		0.621 0.737
HOXB5
M05053_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2 		0.621 0.737
HOXB5
M05055_2.00 		Homo sapiens
NTMATKAB
VTMATKAN		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1 		0.621 0.737
HOXB5
M05056_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2 		0.621 0.737
Abd-B
M00554_2.00 		Drosophila melanogaster
NWTWAYDDNN
NNHHRTWAWN		 PBM
Busser et al.(2012a)
Abd-B 		0.612 0.649
Abd-B
M03772_2.00 		Drosophila melanogaster
DRTCRTAAAWH
DWTTTAYGAYH		 SELEX
Nitta et al.(2015)
Abd-B_1 		0.612 0.649
Abd-B
M03773_2.00 		Drosophila melanogaster
DTTTTATKRCY
RGYMATAAAAH		 SELEX
Nitta et al.(2015)
Abd-B_2 		0.612 0.649
Abd-B
M03774_2.00 		Drosophila melanogaster
NKCARYAACGACYW
WRGTCGTTRYTGMN		 SELEX
Nitta et al.(2015)
Abd-B_3 		0.612 0.649
Abd-B
M03775_2.00 		Drosophila melanogaster
DTTTWATGKSTTTY
RAAASMCATWAAAH		 SELEX
Nitta et al.(2015)
Abd-B_4 		0.612 0.649
Abd-B
M06476_2.00 		Drosophila melanogaster
TTTATKR
YMATAAA		 B1H
Mathelier et al.(2014)
MA0165.1 		0.612 0.649
Abd-B
M06211_2.00 		Drosophila melanogaster
YCATAAAA
TTTTATGR		 B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015 		0.612 0.649
Abd-B
M09672_2.00 		Drosophila melanogaster
YMATAAAAHH
DDTTTTATKR		 Misc
Kulakovskiy et al.(2009)
Abd-B 		0.612 0.649
Abd-B
M10779_2.00 		Drosophila melanogaster
VSNTTDATKRCNNN
NNNGYMATHAANSB		 Transfac
Matys et al.(2006)
I$ABDB_01 		0.612 0.649
Abd-B
M10780_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ABDB_Q6 		0.612 0.649
Hoxc5
M00422_2.00 		Mus musculus
NWRATND
HNATYWN		 PBM
Berger et al.(2008)
Hoxc5_2630 		0.609 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R003397 Homeodomain 150 206

Links

Other Homeodomain family TFs
Other Aptenodytes forsteri TFs

1509 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_192725 Agaricus bisporus AGABI2DRAFT_192725 I 0.000
BOTBODRAFT_214576 Botryobasidium botryosum BOTBODRAFT_214576 I 0.000
CAD26261 Encephalitozoon cuniculi CAD26261 D 0.000
CC1G_01962 Coprinopsis cinerea CC1G_01962 I 0.000
CERSUDRAFT_94820 Ceriporiopsis subvermispora CERSUDRAFT_94820 I 0.000
CNJ00280 Cryptococcus neoformans CNJ00280 I 0.000
CY34DRAFT_106181 Suillus luteus CY34DRAFT_106181 I 0.000
CY34DRAFT_109842 Suillus luteus CY34DRAFT_109842 I 0.000
warA Dictyostelium discoideum DDB_G0291075 I 0.000
E5Q_01806 Mixia osmundae E5Q_01806 I 0.000
EDEG_01594 Edhazardia aedis EDEG_01594 I 0.000
EFA86584.1 Polysphondylium pallidum EFA86584.1 I 0.000
EHEL_031090 Encephalitozoon hellem EHEL_031090 I 0.000
Eint_031070 Encephalitozoon intestinalis Eint_031070 I 0.000
EROM_031050 Encephalitozoon romaleae EROM_031050 I 0.000
estExt_fgenesh1_pg.C_10219 Sporobolomyces roseus estExt_fgenesh1_pg.C_10219 I 0.000
estExt_fgeneshDP_pg.C_350041 Dictyostelium purpureum estExt_fgeneshDP_pg.C_350041 I 0.000
e_gw1.10.235.1 Phycomyces blakesleeanus e_gw1.10.235.1 I 0.000
fgeneshMC_pg.1_#_125 Mucor circinelloides fgeneshMC_pg.1_#_125 I 0.000
fgeneshMC_pg.1_#_1591 Mucor circinelloides fgeneshMC_pg.1_#_1591 I 0.000
fgeneshMC_pg.1_#_69 Mucor circinelloides fgeneshMC_pg.1_#_69 I 0.000
fgeneshMC_pg.2_#_8 Mucor circinelloides fgeneshMC_pg.2_#_8 I 0.000
fgeneshMC_pg.4_#_986 Mucor circinelloides fgeneshMC_pg.4_#_986 I 0.000
fgeneshMC_pg.7_#_205 Mucor circinelloides fgeneshMC_pg.7_#_205 N 0.000
fgeneshMC_pg.7_#_41 Mucor circinelloides fgeneshMC_pg.7_#_41 I 0.000
fgeneshPB_pg.18__155 Phycomyces blakesleeanus fgeneshPB_pg.18__155 I 0.000
fgeneshPB_pg.6__195 Phycomyces blakesleeanus fgeneshPB_pg.6__195 I 0.000
FOMPIDRAFT_1128018 Fomitopsis pinicola FOMPIDRAFT_1128018 I 0.000
GALMADRAFT_211191 Galerina marginata GALMADRAFT_211191 I 0.000
GLOINDRAFT_21145 Rhizophagus irregularis GLOINDRAFT_21145 I 0.000
GLOINDRAFT_43985 Rhizophagus irregularis GLOINDRAFT_43985 I 0.000
GLOTRDRAFT_92391 Gloeophyllum trabeum GLOTRDRAFT_92391 I 0.000
H311_05138 Anncaliia algerae H311_05138 I 0.000
J056_004115 Wallemia ichthyophaga J056_004115 I 0.000
JAAARDRAFT_47621 Jaapia argillacea JAAARDRAFT_47621 I 0.000
K443DRAFT_127593 Laccaria amethystina K443DRAFT_127593 I 0.000
KNAG_0A05600 Kazachstania naganishii KNAG_0A05600 I 0.000
L804_00025 Cryptococcus gattii L804_00025 I 0.000
LACBIDRAFT_293988 Laccaria bicolor LACBIDRAFT_293988 I 0.000
M378DRAFT_8263 Amanita muscaria M378DRAFT_8263 I 0.000
M404DRAFT_74218 Pisolithus tinctorius M404DRAFT_74218 I 0.000
M407DRAFT_11655 Tulasnella calospora M407DRAFT_11655 I 0.000
M407DRAFT_4599 Tulasnella calospora M407DRAFT_4599 I 0.000
M408DRAFT_258951 Serendipita vermifera M408DRAFT_258951 I 0.000
M413DRAFT_413744 Hebeloma cylindrosporum M413DRAFT_413744 I 0.000
M896_030550 Ordospora colligata M896_030550 I 0.000
MELLADRAFT_35504 Melampsora laricipopulina MELLADRAFT_35504 I 0.000
Moror_6758 Moniliophthora roreri Moror_6758 I 0.000
MVLG_00113 Microbotryum violaceum MVLG_00113 I 0.000
MVLG_02963 Microbotryum violaceum MVLG_02963 I 0.000
NAPIS_ORF00184 Nosema apis NAPIS_ORF00184 I 0.000
NAPIS_ORF00325 Nosema apis NAPIS_ORF00325 I 0.000
NBO_11g0012 Nosema bombycis NBO_11g0012 I 0.000
NBO_6g0031 Nosema bombycis NBO_6g0031 I 0.000
NBO_85g0005 Nosema bombycis NBO_85g0005 I 0.000
NCAS_0B05980 Naumovozyma castellii NCAS_0B05980 I 0.000
NCER_100211 Nosema ceranae NCER_100211 I 0.000
NCER_100315 Nosema ceranae NCER_100315 I 0.000
NDAI_0B03290 Naumovozyma dairenensis NDAI_0B03290 I 0.000
NEMVEDRAFT_v1g105595 Nematostella vectensis NEMVEDRAFT_v1g105595 D 0.000
NEPG_01845 Nematocida parisii ertm1 NEPG_01845 I 0.000
NERG_00880 Nematocida sp NERG_00880 I 0.000
PAXRUDRAFT_10369 Paxillus rubicundulus PAXRUDRAFT_10369 I 0.000
PGTG_00338 Puccinia graminis PGTG_00338 I 0.000
PHACADRAFT_257545 Phanerochaete carnosa PHACADRAFT_257545 I 0.000
PHLGIDRAFT_55548 Phlebiopsis gigantea PHLGIDRAFT_55548 I 0.000
PIIN_02203 Piriformospora indica PIIN_02203 I 0.000
PILCRDRAFT_101484 Piloderma croceum PILCRDRAFT_101484 N 0.000
PILCRDRAFT_110903 Piloderma croceum PILCRDRAFT_110903 I 0.000
PISMIDRAFT_65337 Pisolithus microcarpus PISMIDRAFT_65337 I 0.000
PLEOSDRAFT_173849 Pleurotus ostreatus PLEOSDRAFT_173849 I 0.000
POSPLDRAFT_98870 Postia placenta POSPLDRAFT_98870 I 0.000
PTTG_03012 Puccinia triticina PTTG_03012 I 0.000
PTTG_07330 Puccinia triticina PTTG_07330 I 0.000
RHTO_02593 Rhodosporidium toruloides RHTO_02593 I 0.000
RHTO_06229 Rhodosporidium toruloides RHTO_06229 I 0.000
RO3G_02291 Rhizopus oryzae RO3G_02291 I 0.000
RO3G_03200 Rhizopus oryzae RO3G_03200 I 0.000
RO3G_08777 Rhizopus oryzae RO3G_08777 I 0.000
RO3G_11930 Rhizopus oryzae RO3G_11930 I 0.000
RO3G_13360 Rhizopus oryzae RO3G_13360 I 0.000
RTG_01934 Rhodotorula glutinis RTG_01934 I 0.000
Scas_Contig613.11 Saccharomyces castellii Scas_Contig613.11 I 0.000
SCHCODRAFT_257987 Schizophyllum commune SCHCODRAFT_257987 I 0.000
SCLCIDRAFT_97512 Scleroderma citrinum SCLCIDRAFT_97512 I 0.000
SERLA73DRAFT_72643 Serpula lacrymans SERLA73DRAFT_72643 I 0.000
SPPG_05107 Spizellomyces punctatus SPPG_05107 I 0.000
THOM_0497 Trachipleistophora hominis THOM_0497 I 0.000
V565_070630 Rhizoctonia solani V565_070630 I 0.000
VCUG_00708 Vavraia culicis VCUG_00708 I 0.000
WALSEDRAFT_59197 Wallemia sebi WALSEDRAFT_59197 I 0.000
YALI0_F16852g Yarrowia lipolytica YALI0_F16852g I 0.000