Gfo_R008526 (Geospiza fortis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gfo_R008526 T226202_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HDX
M01246_2.00 		Homo sapiens
HNNNNNN
NNNNNND		 PBM
Lambert et al.(2019)
pTH11271 		0.867 0.991
Hdx
M00463_2.00 		Mus musculus
HNWYHNN
NNDRWND		 PBM
Berger et al.(2008)
Hdx_3845 		0.867 0.991
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R008526 Homeodomain 2 60
Gfo_R008526 Homeodomain 393 452

Links

Other Homeodomain family TFs
Other Geospiza fortis TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02688 Capronia coronata A1O1_02688 N
A1O3_05266 Capronia epimyces A1O3_05266 N
A1O5_01442 Cladophialophora psammophila A1O5_01442 N
A1O7_08334 Cladophialophora yegresii A1O7_08334 N
A1O9_10004 Exophiala aquamarina A1O9_10004 N
BAUCODRAFT_72261 Baudoinia compniacensis BAUCODRAFT_72261 N
ACLA_016070 Aspergillus clavatus CADACLAG00000861 N
CADAFLAG00009101 Aspergillus flavus CADAFLAG00009101 N
AFUA_5G13080 Aspergillus fumigatus CADAFUAG00006036 N
CADAORAG00011561 Aspergillus oryzae CADAORAG00011561 N
NFIA_073950 Neosartorya fischeri CADNFIAG00007563 N
CFIO01_11426 Colletotrichum fioriniae CFIO01_11426 N
CGGC5_6062 Colletotrichum gloeosporioides CGGC5_6062 N
CH063_05999 Colletotrichum higginsianum CH063_05999 N
CMQ_5876 Grosmannia clavigera CMQ_5876 N
Cob_11832 Colletotrichum orbiculare Cob_11832 N
CPUR_02213 Claviceps purpurea CPUR_02213 N
CSUB01_00157 Colletotrichum sublineola CSUB01_00157 N
EPUS_05767 Endocarpon pusillum EPUS_05767 N
EURHEDRAFT_416038 Aspergillus ruber EURHEDRAFT_416038 N
e_gw1.1.3574.1 Cryphonectria parasitica e_gw1.1.3574.1 N
F503_00183 Ophiostoma piceae uamh F503_00183 N
G647_07293 Cladophialophora carrionii G647_07293 N
GGTG_02625 Gaeumannomyces graminis GGTG_02625 N
GLRG_03112 Colletotrichum graminicola GLRG_03112 N
GSTUM_00005836001 Tuber melanosporum GSTUM_00005836001 N
HMPREF1120_01100 Exophiala dermatitidis HMPREF1120_01100 N
HMPREF1541_03708 Cyphellophora europaea HMPREF1541_03708 N
HMPREF1624_04517 Sporothrix schenckii HMPREF1624_04517 N
M437DRAFT_47906 Aureobasidium melanogenum M437DRAFT_47906 N
MAC_02105 Metarhizium acridum MAC_02105 N
MAJ_05489 Metarhizium majus MAJ_05489 N
MAM_02243 Metarhizium album MAM_02243 N
MANI_002092 Metarhizium anisopliae MANI_002092 N
MBR_07319 Metarhizium brunneum MBR_07319 N
MGU_05987 Metarhizium guizhouense MGU_05987 N
MYCTH_2301100 Myceliophthora thermophila MYCTH_2301100 N
OCS_02045 Ophiocordyceps sinensis OCS_02045 N
Pc21g08180 Penicillium chrysogenum Pc21g08180 N
PCH_Pc21g08180 Penicillium rubens PCH_Pc21g08180 N
PDIP_58830 Penicillium digitatum PDIP_58830 N
PFICI_07761 Pestalotiopsis fici PFICI_07761 N
PMAA_036110 Talaromyces marneffei PMAA_036110 N
PV05_00754 Exophiala xenobiotica PV05_00754 N
PV06_05084 Exophiala oligosperma PV06_05084 N
PV07_00953 Cladophialophora immunda PV07_00953 N
PV08_09110 Exophiala spinifera PV08_09110 N
PV09_02763 Verruconis gallopava PV09_02763 N
PV10_04998 Exophiala mesophila PV10_04998 N
PV11_02440 Exophiala sideris PV11_02440 N
PVAR5_1770 Byssochlamys spectabilis PVAR5_1770 N
S40285_01658 Stachybotrys chlorohalonata S40285_01658 N
S40288_00446 Stachybotrys chartarum S40288_00446 N
SPBR_05600 Sporothrix brasiliensis SPBR_05600 N
TRIATDRAFT_321925 Trichoderma atroviride TRIATDRAFT_321925 N
TRIREDRAFT_3449 Trichoderma reesei TRIREDRAFT_3449 N
TRIVIDRAFT_229241 Trichoderma virens TRIVIDRAFT_229241 N
TSTA_056080 Talaromyces stipitatus TSTA_056080 N
U727_0043104031 Penicillium solitum U727_0043104031 N
VHEMI00945 Torrubiella hemipterigena VHEMI00945 N
X797_006673 Metarhizium robertsii X797_006673 N
Z517_05121 Fonsecaea pedrosoi Z517_05121 N
Z518_05219 Rhinocladiella mackenziei Z518_05219 N
Z519_11826 Cladophialophora bantiana Z519_11826 N