orange1.1g006754m.g (Citrus sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 orange1.1g006754m.g T229146_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g006754m Homeodomain 500 556
orange1.1g006832m Homeodomain 497 553
orange1.1g006856m Homeodomain 496 552
orange1.1g008193m Homeodomain 442 498

Links

Other Homeodomain family TFs
Other Citrus sinensis TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRFL3 Arabidopsis thaliana AT1G17460 N
Bo5g023810 Brassica oleracea Bo5g023810 N
Bo6g091360 Brassica oleracea Bo6g091360 N
Bostr.7128s0357 Boechera stricta Bostr.7128s0357 N
Bra003870 Brassica rapa Bra003870 N
Bra003871 Brassica rapa Bra003871 N
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N
Carubv10012426m.g Capsella rubella Carubv10012426m.g N
TRFL3 Arabidopsis lyrata fgenesh2_kg.1__1907__AT1G17460.1 N
Thhalv10007199m.g Eutrema salsugineum Thhalv10007199m.g N