ACAC_0001212901 (Angiostrongylus cantonensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ACAC_0001212901 T232779_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.763 0.500
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.763 0.500
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.763 0.500
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.697 0.364
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.697 0.364
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.697 0.364
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.697 0.364
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.697 0.364
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.697 0.364
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.697 0.364
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.697 0.364
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.697 0.364
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACAC_0001212901-mRNA-1 Homeodomain 29 72

Links

Other Homeodomain family TFs
Other Angiostrongylus cantonensis TFs

1237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017853 Oryza indica BGIOSGA017853 N 0.000
BRADI2G22130 Brachypodium distachyon BRADI2G22130 N 0.000
Ca_15677 Cicer arietinum Ca_15677 N 0.000
F775_06506 Aegilops tauschii F775_06506 N 0.000
GRMZM2G174610 Zea mays GRMZM2G174610 N 0.000
GSMUA_AchrUn_randomG18890_001 Musa acuminata GSMUA_AchrUn_randomG18890_001 N 0.000
LPERR05G16310 Leersia perrieri LPERR05G16310 N 0.000
MLOC_14005 Hordeum vulgare MLOC_14005 N 0.000
OB05G28010 Oryza brachyantha OB05G28010 N 0.000
OBART05G20480 Oryza barthii OBART05G20480 N 0.000
OGLUM05G21650 Oryza glumaepatula OGLUM05G21650 N 0.000
OLONG_007066 Oryza longistaminata OLONG_007066 N 0.000
OMERI05G18410 Oryza meridionalis OMERI05G18410 N 0.000
ONIVA02G25740 Oryza nivara ONIVA02G25740 N 0.000
OPUNC05G18160 Oryza punctata OPUNC05G18160 N 0.000
ORGLA05G0178700 Oryza glaberrima ORGLA05G0178700 N 0.000
ORUFI05G21790 Oryza rufipogon ORUFI05G21790 N 0.000
OS05G0481400 Oryza sativa OS05G0481400 N 0.000
Pavir.J00951 Panicum virgatum Pavir.J00951 N 0.000
Pavir.J04157 Panicum virgatum Pavir.J04157 N 0.000
PDK_20s1595621g002 Phoenix dactylifera PDK_20s1595621g002 N 0.000
Pm000222 Prunus mume Pm000222 N 0.000
Sb09g023630 Sorghum bicolor Sb09g023630 N 0.000
Traes_1AL_C340A8E74 Triticum aestivum Traes_1AL_C340A8E74 N 0.000
Traes_1BL_A8FC9D468 Triticum aestivum Traes_1BL_A8FC9D468 N 0.000
Traes_1DL_1806CFE5F Triticum aestivum Traes_1DL_1806CFE5F N 0.000
Traes_1DL_1806CFE5F1 Triticum aestivum Traes_1DL_1806CFE5F1 N 0.000
TRIUR3_13028 Triticum urartu TRIUR3_13028 N 0.000