CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm000222
(
Prunus mume
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pm000222
T022035_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm000222
B3
143
233
FVKSMVRSHVYSCFWLGLPSKFCEDHLSKTGSEMVLEDEDGNEYDAVYIGKRAGLSGGWRGFALEHKLDDGDALVFELTEPARFKIYIVKA
Links
Other
B3
family TFs
Other
Prunus mume
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_06s0004g08270
Vitis vinifera
VIT_06s0004g08270
N
0.868
gene28054-v1.0-hybrid
Fragaria vesca
gene28054-v1.0-hybrid
N
0.839
GLYMA02G40400
Glycine max
GLYMA02G40400
N
0.824
Ca_15677
Cicer arietinum
Ca_15677
N
0.824
PK16911.1
Cannabis sativa
PK16911.1
N
0.783
orange1.1g039664m.g
Citrus sinensis
orange1.1g039664m.g
N
0.741
Traes_1BL_A8FC9D468
Triticum aestivum
Traes_1BL_A8FC9D468
N
0.736
Ciclev10002972m.g
Citrus clementina
Ciclev10002972m.g
N
0.730
F775_06506
Aegilops tauschii
F775_06506
N
0.728
MTR_2g102450
Medicago truncatula
MTR_2g102450
N
0.728
Traes_1DL_1806CFE5F1
Triticum aestivum
Traes_1DL_1806CFE5F1
N
0.728
Traes_1DL_1806CFE5F
Triticum aestivum
Traes_1DL_1806CFE5F
N
0.728
TRIUR3_13028
Triticum urartu
TRIUR3_13028
N
0.728
evm.TU.supercontig_2.268
Carica papaya
evm.TU.supercontig_2.268
N
0.728
Traes_1AL_C340A8E74
Triticum aestivum
Traes_1AL_C340A8E74
N
0.725
Cagra.0891s0022
Capsella grandiflora
Cagra.0891s0022
N
0.725
Carubv10026947m.g
Capsella rubella
Carubv10026947m.g
N
0.725
Pavir.J04157
Panicum virgatum
Pavir.J04157
N
0.725
Al_scaffold_0008_2296
Arabidopsis lyrata
Al_scaffold_0008_2296
N
0.717
Pavir.J00951
Panicum virgatum
Pavir.J00951
N
0.717
AT5G58280
Arabidopsis thaliana
AT5G58280
N
0.714
Si022916m.g
Setaria italica
Si022916m.g
N
0.714
PDK_20s1595621g002
Phoenix dactylifera
PDK_20s1595621g002
N
0.714
BGIOSGA017853
Oryza indica
BGIOSGA017853
N
0.703
BRADI2G22130
Brachypodium distachyon
BRADI2G22130
N
0.703
MLOC_14005
Hordeum vulgare
MLOC_14005
N
0.703
OB05G28010
Oryza brachyantha
OB05G28010
N
0.703
OBART05G20480
Oryza barthii
OBART05G20480
N
0.703
OGLUM05G21650
Oryza glumaepatula
OGLUM05G21650
N
0.703
OMERI05G18410
Oryza meridionalis
OMERI05G18410
N
0.703
ONIVA02G25740
Oryza nivara
ONIVA02G25740
N
0.703
ORGLA05G0178700
Oryza glaberrima
ORGLA05G0178700
N
0.703
ORUFI05G21790
Oryza rufipogon
ORUFI05G21790
N
0.703
OS05G0481400
Oryza sativa
OS05G0481400
N
0.703