CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0891s0022
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.0891s0022
T022733_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0891s0022.1.p
B3
157
248
FVKSMLRSHVYSCFWLGLPSGFCVDNFSEETIEVVLEDEEGEEYEAVYIGKRTGLSGGWKRFALDHKLDDGDALLFELVEPKRFKIYVFRGN
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10026947m.g
Capsella rubella
Carubv10026947m.g
N
1.000
Al_scaffold_0008_2296
Arabidopsis lyrata
Al_scaffold_0008_2296
N
0.902
AT5G58280
Arabidopsis thaliana
AT5G58280
N
0.870
VIT_06s0004g08270
Vitis vinifera
VIT_06s0004g08270
N
0.728
Pm000222
Prunus mume
Pm000222
N
0.725
orange1.1g039664m.g
Citrus sinensis
orange1.1g039664m.g
N
0.718
GLYMA02G40400
Glycine max
GLYMA02G40400
N
0.703