CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_06s0004g08270
(
Vitis vinifera
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
VIT_06s0004g08270
T021893_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_06s0004g08270.t01
B3
135
226
FVKSMVRSHVYSCFWLGLPSKFCEDHLPKTLLDMVLEDENGTEYGAVYIGKRTGLSGGWRGFALDHKLDDGDALVFELIEPARFKVYIVRAS
Links
Other
B3
family TFs
Other
Vitis vinifera
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G40400
Glycine max
GLYMA02G40400
N
0.879
Pm000222
Prunus mume
Pm000222
N
0.868
gene28054-v1.0-hybrid
Fragaria vesca
gene28054-v1.0-hybrid
N
0.806
Ca_15677
Cicer arietinum
Ca_15677
N
0.793
PK16911.1
Cannabis sativa
PK16911.1
N
0.783
orange1.1g039664m.g
Citrus sinensis
orange1.1g039664m.g
N
0.753
PGSC0003DMG400020648
Solanum tuberosum
PGSC0003DMG400020648
N
0.750
Solyc06g007530.2
Solanum lycopersicum
Solyc06g007530.2
N
0.750
Ciclev10002972m.g
Citrus clementina
Ciclev10002972m.g
N
0.746
MTR_2g102450
Medicago truncatula
MTR_2g102450
N
0.739
evm.TU.supercontig_2.268
Carica papaya
evm.TU.supercontig_2.268
N
0.739
Cagra.0891s0022
Capsella grandiflora
Cagra.0891s0022
N
0.728
Carubv10026947m.g
Capsella rubella
Carubv10026947m.g
N
0.728
PDK_20s1595621g002
Phoenix dactylifera
PDK_20s1595621g002
N
0.728
Traes_1BL_A8FC9D468
Triticum aestivum
Traes_1BL_A8FC9D468
N
0.725
F775_06506
Aegilops tauschii
F775_06506
N
0.717
Traes_1DL_1806CFE5F1
Triticum aestivum
Traes_1DL_1806CFE5F1
N
0.717
Traes_1DL_1806CFE5F
Triticum aestivum
Traes_1DL_1806CFE5F
N
0.717
TRIUR3_13028
Triticum urartu
TRIUR3_13028
N
0.717
MLOC_14005
Hordeum vulgare
MLOC_14005
N
0.716
Traes_1AL_C340A8E74
Triticum aestivum
Traes_1AL_C340A8E74
N
0.707