CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_2.268
(
Carica papaya
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
evm.TU.supercontig_2.268
T023130_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_2.268
B3
224
315
FTKSMVRSHVYSCFWLGLPTKFCVDFLPKSTVDMVLEDEDGKEFDAIYIGRRTGLSGGWRAFALEHKLDDGDGLVFELIESNRFKIYIFRVS
Links
Other
B3
family TFs
Other
Carica papaya
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK16911.1
Cannabis sativa
PK16911.1
N
0.783
gene28054-v1.0-hybrid
Fragaria vesca
gene28054-v1.0-hybrid
N
0.750
PGSC0003DMG400020648
Solanum tuberosum
PGSC0003DMG400020648
N
0.739
Solyc06g007530.2
Solanum lycopersicum
Solyc06g007530.2
N
0.739
VIT_06s0004g08270
Vitis vinifera
VIT_06s0004g08270
N
0.739
Ca_15677
Cicer arietinum
Ca_15677
N
0.739
GLYMA02G40400
Glycine max
GLYMA02G40400
N
0.728
Pm000222
Prunus mume
Pm000222
N
0.728
MTR_2g102450
Medicago truncatula
MTR_2g102450
N
0.707
Pavir.J04157
Panicum virgatum
Pavir.J04157
N
0.707