CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene28054-v1.0-hybrid
(
Fragaria vesca
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
gene28054-v1.0-hybrid
T023256_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna28054.1-v1.0-hybrid
B3
133
225
FVKSMVRSHVYSCFWLGLPSKFCEDHLPKSSDSDMVLEDEDGNECDAKYLSKRTGLSGGWRGFALEHKLDDGDALVFELVEPTRFKIYIVKVT
Links
Other
B3
family TFs
Other
Fragaria vesca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm000222
Prunus mume
Pm000222
N
0.839
PK16911.1
Cannabis sativa
PK16911.1
N
0.817
VIT_06s0004g08270
Vitis vinifera
VIT_06s0004g08270
N
0.806
Ca_15677
Cicer arietinum
Ca_15677
N
0.763
GLYMA02G40400
Glycine max
GLYMA02G40400
N
0.753
evm.TU.supercontig_2.268
Carica papaya
evm.TU.supercontig_2.268
N
0.750
MTR_2g102450
Medicago truncatula
MTR_2g102450
N
0.728