CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G40400
(
Glycine max
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GLYMA02G40400
T019239_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G40400.1
B3
81
171
FIKSMVRSHVYSCFWLGLPSKFCEEHLPKTLHDMVLEDENGSEYEAVYIGNRAGLSGGWRAFALDHKLDDGDALVFELIEASRFKIYIVRA
GLYMA02G40400.2
B3
140
230
FIKSMVRSHVYSCFWLGLPSKFCEEHLPKTLHDMVLEDENGSEYEAVYIGNRAGLSGGWRAFALDHKLDDGDALVFELIEASRFKIYIVRA
GLYMA02G40400.3
B3
140
230
FIKSMVRSHVYSCFWLGLPSKFCEEHLPKTLHDMVLEDENGSEYEAVYIGNRAGLSGGWRAFALDHKLDDGDALVFELIEASRFKIYIVRA
GLYMA02G40400.4
B3
73
163
FIKSMVRSHVYSCFWLGLPSKFCEEHLPKTLHDMVLEDENGSEYEAVYIGNRAGLSGGWRAFALDHKLDDGDALVFELIEASRFKIYIVRA
GLYMA02G40400.5
B3
64
152
INLNSSNPSFIKSMGLPSKFCEEHLPKTLHDMVLEDENGSEYEAVYIGNRAGLSGGWRAFALDHKLDDGDALVFELIEASRFKIYIVRA
Links
Other
B3
family TFs
Other
Glycine max
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_06s0004g08270
Vitis vinifera
VIT_06s0004g08270
N
0.879
Pm000222
Prunus mume
Pm000222
N
0.824
Ciclev10002972m.g
Citrus clementina
Ciclev10002972m.g
N
0.794
Ca_15677
Cicer arietinum
Ca_15677
N
0.793
orange1.1g039664m.g
Citrus sinensis
orange1.1g039664m.g
N
0.788
PK16911.1
Cannabis sativa
PK16911.1
N
0.761
gene28054-v1.0-hybrid
Fragaria vesca
gene28054-v1.0-hybrid
N
0.753
MTR_2g102450
Medicago truncatula
MTR_2g102450
N
0.728
evm.TU.supercontig_2.268
Carica papaya
evm.TU.supercontig_2.268
N
0.728
PGSC0003DMG400020648
Solanum tuberosum
PGSC0003DMG400020648
N
0.725
Solyc06g007530.2
Solanum lycopersicum
Solyc06g007530.2
N
0.725
PDK_20s1595621g002
Phoenix dactylifera
PDK_20s1595621g002
N
0.725
Traes_1BL_A8FC9D468
Triticum aestivum
Traes_1BL_A8FC9D468
N
0.703
Cagra.0891s0022
Capsella grandiflora
Cagra.0891s0022
N
0.703
Carubv10026947m.g
Capsella rubella
Carubv10026947m.g
N
0.703