CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Al_scaffold_0008_2296
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Al_scaffold_0008_2296
T018332_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Al_scaffold_0008_2296
B3
125
216
FVKSMVRSHVYSCFWLGLPSRFCVDNFPEETMEIVLEDEEGEEYEAVYIGRRSGLSGGWKRFALDHKLDDGDALLFQLVEPKRFKIYVFKGN
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT5G58280
Arabidopsis thaliana
AT5G58280
N
0.935
Cagra.0891s0022
Capsella grandiflora
Cagra.0891s0022
N
0.902
Carubv10026947m.g
Capsella rubella
Carubv10026947m.g
N
0.902
Ca_15677
Cicer arietinum
Ca_15677
N
0.717
Pm000222
Prunus mume
Pm000222
N
0.717