CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA017853
(
Oryza indica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
BGIOSGA017853
T018538_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA017853-PA
B3
139
230
FVKTMVRSHVSSCFWLGLPTRFCKLHLPPKEYKMVLEDEEGGEFDSVYIGNRTGLSGGWRGFAMHHNLEDGDSLVFELAEPDRFKIYIIKAV
Links
Other
B3
family TFs
Other
Oryza indica
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART05G20480
Oryza barthii
OBART05G20480
N
1.000
OGLUM05G21650
Oryza glumaepatula
OGLUM05G21650
N
1.000
ONIVA02G25740
Oryza nivara
ONIVA02G25740
N
1.000
ORGLA05G0178700
Oryza glaberrima
ORGLA05G0178700
N
1.000
ORUFI05G21790
Oryza rufipogon
ORUFI05G21790
N
1.000
OS05G0481400
Oryza sativa
OS05G0481400
N
1.000
OPUNC05G18160
Oryza punctata
OPUNC05G18160
N
0.978
OMERI05G18410
Oryza meridionalis
OMERI05G18410
N
0.967
LPERR05G16310
Leersia perrieri
LPERR05G16310
N
0.946
OB05G28010
Oryza brachyantha
OB05G28010
N
0.924
BRADI2G22130
Brachypodium distachyon
BRADI2G22130
N
0.913
Sb09g023630
Sorghum bicolor
Sb09g023630
N
0.880
Si022916m.g
Setaria italica
Si022916m.g
N
0.870
GRMZM2G174610
Zea mays
GRMZM2G174610
N
0.859
Pavir.J04157
Panicum virgatum
Pavir.J04157
N
0.859
Traes_1BL_A8FC9D468
Triticum aestivum
Traes_1BL_A8FC9D468
N
0.857
F775_06506
Aegilops tauschii
F775_06506
N
0.848
Traes_1DL_1806CFE5F1
Triticum aestivum
Traes_1DL_1806CFE5F1
N
0.848
Traes_1DL_1806CFE5F
Triticum aestivum
Traes_1DL_1806CFE5F
N
0.848
TRIUR3_13028
Triticum urartu
TRIUR3_13028
N
0.848
OLONG_007066
Oryza longistaminata
OLONG_007066
N
0.837
Traes_1AL_C340A8E74
Triticum aestivum
Traes_1AL_C340A8E74
N
0.837
Pavir.J00951
Panicum virgatum
Pavir.J00951
N
0.837
GSMUA_AchrUn_randomG18890_001
Musa acuminata
GSMUA_AchrUn_randomG18890_001
N
0.804
MLOC_14005
Hordeum vulgare
MLOC_14005
N
0.804
PDK_20s1595621g002
Phoenix dactylifera
PDK_20s1595621g002
N
0.761
Ca_15677
Cicer arietinum
Ca_15677
N
0.750
Pm000222
Prunus mume
Pm000222
N
0.703