CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0001810001
(
Heligmosomoides bakeri
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
HPBE_0001810001
T234418_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0001810001-mRNA-1
Homeodomain
14
73
QLFEVPKLEKWFKTDSSPSRQKLLNYMNILNGSSYRRNHQKISYQQICNWFANQRASTRR
HPBE_0001810001-mRNA-1
Homeodomain
204
271
ARSRLMFDPLTELPILEKWFEENPHPTWIQIDQYTQMLNGCPYRENYPHISQHNVKIWFKNRRAKCKR
Links
Other
Homeodomain
family TFs
Other
Heligmosomoides bakeri
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000490701
Angiostrongylus cantonensis
ACAC_0000490701
N
0.708
ACOC_0001036301
Angiostrongylus costaricensis
ACOC_0001036301
N
0.708
ANCDUO_06311
Ancylostoma duodenale
ANCDUO_06311
N
0.781
ASU_05009
Ascaris suum
ASU_05009
N
0.640
Bm10163
Brugia malayi
Bm10163
N
0.682
Bm7640
Brugia malayi
Bm7640
N
0.758
BXY_0855500
Bursaphelenchus xylophilus
BXY_0855500
N
0.630
DICVIV_09532
Dictyocaulus viviparus
DICVIV_09532
N
0.708
EEL_0000412901
Elaeophora elaphi
EEL_0000412901
N
0.749
EVEC_0001166801
Enterobius vermicularis
EVEC_0001166801
N
0.659
Hba_21527
Heterorhabditis bacteriophora
Hba_21527
N
0.830
HCOI00637900
Haemonchus contortus
HCOI00637900
N
0.734
HPLM_0001532901
Haemonchus placei
HPLM_0001532901
N
0.734
L596_g9224
Steinernema carpocapsae
L596_g9224
N
0.632
L889_g25145
Steinernema feltiae
L889_g25145
N
0.669
L892_g9710
Steinernema scapterisci
L892_g9710
N
0.665
L898_g34810
Steinernema monticolum
L898_g34810
N
0.675
LOAG_03092
Loa loa
LOAG_03092
N
0.728
MhA1_Contig354.frz3.gene60
Meloidogyne hapla
MhA1_Contig354.frz3.gene60
N
0.630
Minc03019
Meloidogyne incognita
Minc03019
N
0.623
nAv.1.0.1.g04870
Acanthocheilonema viteae
nAv.1.0.1.g04870
N
0.758
nDi.2.2.2.g01589
Dirofilaria immitis
nDi.2.2.2.g01589
N
0.756
NECAME_03333
Necator americanus
NECAME_03333
N
0.740
nOo.2.0.1.g00722
Onchocerca ochengi
nOo.2.0.1.g00722
N
0.756
RSKR_0001108600
Rhabditophanes kr3021
RSKR_0001108600
N
0.628
scaffold1322-EXSNAP2012.4
Pristionchus exspectatus
scaffold1322-EXSNAP2012.4
N
0.718
SMUV_0000944701
Syphacia muris
SMUV_0000944701
N
0.626
TCLT_0000625901
Thelazia callipaeda
TCLT_0000625901
N
0.747
WBGene00239750
Onchocerca volvulus
WBGene00239750
N
0.756
WUBG_04888
Wuchereria bancrofti
WUBG_04888
N
0.758