TMUE_s0059006400 (Trichuris muris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TMUE_s0059006400 T236943_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.747 0.370
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.747 0.370
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.747 0.370
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.747 0.370
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.747 0.370
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.747 0.370
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.747 0.370
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.747 0.370
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.747 0.370
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.658 0.217
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.658 0.217
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.658 0.217
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TMUE_s0059006400 Homeodomain 291 336

Links

Other Homeodomain family TFs
Other Trichuris muris TFs

1218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.000
ANCCAN_03327 Ancylostoma caninum ANCCAN_03327 N 0.000
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.000
ASTEI06918 Anopheles stephensi ASTEI06918 N 0.000
BGLB004491 Biomphalaria glabrata BGLB004491 I 0.000
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.000
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.000
CLEC007171 Cimex lectularius CLEC007171 I 0.000
Cmyd_10012400 Chelonia mydas Cmyd_10012400 I 0.000
D917_01051 Trichinella nativa D917_01051 I 0.000
DILT_0000101001 Diphyllobothrium latum DILT_0000101001 N 0.000
EFV57629 Trichinella spiralis EFV57629 I 0.000
DLX4 Bos taurus ENSBTAG00000007353 I 0.000
DLX3 Bos taurus ENSBTAG00000017409 I 0.000
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.000
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.000
DLX4 Myotis lucifugus ENSMLUG00000007268 I 0.000
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.000
NOBOX Oryctolagus cuniculus ENSOCUG00000001027 I 0.000
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.000
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.000
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.000
GF12207 Drosophila ananassae FBgn0089246 I 0.000
GF13343 Drosophila ananassae FBgn0090375 I 0.000
HelroG173001 Helobdella robusta HelroG173001 I 0.000
HNAJ_0000529701 Hymenolepis nana HNAJ_0000529701 N 0.000
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.000
MCOS_0000655901 Mesocestoides corti MCOS_0000655901 N 0.000
NECAME_16530 Necator americanus NECAME_16530 I 0.000
scaffold251-EXSNAP2012.22 Pristionchus exspectatus scaffold251-EXSNAP2012.22 I 0.000
SNAPOd2T00016706001 Oikopleura dioica SNAPOd2T00016706001 I 0.000
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I 0.000
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.000
T265_00628 Opisthorchis viverrini T265_00628 I 0.000
T265_02852 Opisthorchis viverrini T265_02852 I 0.000
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.000
TTAC_0000701101 Hydatigera taeniaeformis TTAC_0000701101 N 0.000
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.000